Analysis of interatomic Contacts of Structural Units in PDB entry:
2OAW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2OAW entry

There are 4 chains in PDB entry 2OAW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 1006ASP 1070
B
 LYS 2006ASP 2070
C
 LYS 3006ASP 3070
D
 LYS 4006ASP 4070
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 2OAW

There are 4 sheets in PDB entry 2OAW. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1053 1062first strand
Strand 2
A
1041 1050anti-parallel
Strand 3
A
1030 1035anti-parallel
Strand 4
A
1007 1011anti-parallel
Strand 5
A
1066 1068anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2053 2062first strand
Strand 2
B
2041 2050anti-parallel
Strand 3
B
2030 2035anti-parallel
Strand 4
B
2007 2011anti-parallel
Strand 5
B
2066 2068anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
3053 3062first strand
Strand 2
C
3041 3050anti-parallel
Strand 3
C
3030 3035anti-parallel
Strand 4
C
3008 3011anti-parallel
Strand 5
C
3066 3068anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
4053 4062first strand
Strand 2
D
4041 4050anti-parallel
Strand 3
D
4030 4035anti-parallel
Strand 4
D
4008 4011anti-parallel
Strand 5
D
4066 4068anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il