Analysis of interatomic Contacts of Structural Units in PDB entry:
2OCE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2OCE entry

There is 1 chain in PDB entry 2OCE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 2GLY 730
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 42 helices in PDB entry 2OCE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 13Right-handed alpha
Helix 2
2
A
21 33Right-handed alpha
Helix 3
3
A
37 45Right-handed alpha
Helix 4
4
A
45 50Right-handed alpha
Helix 5
5
A
53 84Right-handed alpha
Helix 6
6
A
88 98Right-handed alpha
Helix 7
7
A
100 109Right-handed alpha
Helix 8
8
A
117 125Right-handed alpha
Helix 9
9
A
127 137Right-handed alpha
Helix 10
10
A
141 148Right-handed alpha
Helix 11
11
A
149 150Right-handed 310
Helix 12
12
A
151 155Right-handed 310
Helix 13
13
A
158 175Right-handed alpha
Helix 14
14
A
177 191Right-handed alpha
Helix 15
15
A
201 206Right-handed alpha
Helix 16
16
A
207 210Right-handed 310
Helix 17
17
A
223 237Right-handed alpha
Helix 18
18
A
254 263Right-handed alpha
Helix 19
19
A
271 288Right-handed alpha
Helix 20
20
A
288 322Right-handed alpha
Helix 21
21
A
367 382Right-handed alpha
Helix 22
22
A
394 407Right-handed alpha
Helix 23
23
A
409 413Right-handed 310
Helix 24
24
A
423 430Right-handed alpha
Helix 25
25
A
430 437Right-handed alpha
Helix 26
26
A
441 456Right-handed alpha
Helix 27
27
A
456 462Right-handed alpha
Helix 28
28
A
463 464Right-handed 310
Helix 29
29
A
465 469Right-handed 310
Helix 30
30
A
479 497Right-handed alpha
Helix 31
31
A
506 512Right-handed alpha
Helix 32
32
A
517 532Right-handed alpha
Helix 33
33
A
536 543Right-handed 310
Helix 34
34
A
547 555Right-handed alpha
Helix 35
35
A
565 569Right-handed 310
Helix 36
36
A
573 575Right-handed 310
Helix 37
37
A
576 582Right-handed alpha
Helix 38
38
A
589 593Right-handed 310
Helix 39
39
A
622 627Right-handed alpha
Helix 40
40
A
641 646Right-handed 310
Helix 41
41
A
684 688Right-handed 310
Helix 42
42
A
694 699Right-handed alpha
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There are 5 sheets in PDB entry 2OCE. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
215 218first strand
Strand 2
A
193 198anti-parallel
Strand 3
A
239 244anti-parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
331 335first strand
Strand 2
A
342 347anti-parallel
Strand 3
A
353 359anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
386 390first strand
Strand 2
A
415 419parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
679 680first strand
Strand 2
A
669 673anti-parallel
Strand 3
A
657 666anti-parallel
Strand 4
A
704 708anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
711 713first strand
Strand 2
A
718 720anti-parallel
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