Analysis of interatomic Contacts of Structural Units in PDB entry:
2OFW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2OFW entry

There are 8 chains in PDB entry 2OFW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
ASN 27PRO 227
B
VAL 35PRO 227
C
ARG 24PRO 227
D
ARG 24PRO 227
E
ALA 25PRO 227
F
ARG 24PRO 227
G
ASN 27PRO 227
H
VAL 35PRO 227
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 63 helices in PDB entry 2OFW. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
36 45Right-handed alpha
Helix 2
2
A
64 78Right-handed alpha
Helix 3
3
A
88 92Right-handed alpha
Helix 4
4
A
102 124Right-handed alpha
Helix 5
5
A
135 149Right-handed alpha
Helix 6
6
A
161 169Right-handed alpha
Helix 7
7
A
172 179Right-handed alpha
Helix 8
8
A
208 223Right-handed alpha
Helix 9
9
B
36 42Right-handed alpha
Helix 10
10
B
64 79Right-handed alpha
Helix 11
11
B
88 92Right-handed alpha
Helix 12
12
B
102 123Right-handed alpha
Helix 13
13
B
135 148Right-handed alpha
Helix 14
14
B
161 169Right-handed alpha
Helix 15
15
B
172 179Right-handed alpha
Helix 16
16
B
208 223Right-handed alpha
Helix 17
17
C
36 45Right-handed alpha
Helix 18
18
C
64 79Right-handed alpha
Helix 19
19
C
88 92Right-handed alpha
Helix 20
20
C
102 123Right-handed alpha
Helix 21
21
C
135 148Right-handed alpha
Helix 22
22
C
161 169Right-handed alpha
Helix 23
23
C
172 179Right-handed alpha
Helix 24
24
C
208 223Right-handed alpha
Helix 25
25
D
36 45Right-handed alpha
Helix 26
26
D
64 78Right-handed alpha
Helix 27
27
D
88 92Right-handed alpha
Helix 28
28
D
102 123Right-handed alpha
Helix 29
29
D
135 149Right-handed alpha
Helix 30
30
D
161 167Right-handed alpha
Helix 31
31
D
172 179Right-handed alpha
Helix 32
32
D
208 223Right-handed alpha
Helix 33
33
E
36 45Right-handed alpha
Helix 34
34
E
64 79Right-handed alpha
Helix 35
35
E
88 92Right-handed alpha
Helix 36
36
E
102 124Right-handed alpha
Helix 37
37
E
135 149Right-handed alpha
Helix 38
38
E
161 169Right-handed alpha
Helix 39
39
E
172 179Right-handed alpha
Helix 40
40
E
208 222Right-handed alpha
Helix 41
41
F
36 45Right-handed alpha
Helix 42
42
F
64 79Right-handed alpha
Helix 43
43
F
88 92Right-handed alpha
Helix 44
44
F
102 124Right-handed alpha
Helix 45
45
F
135 148Right-handed alpha
Helix 46
46
F
161 168Right-handed alpha
Helix 47
47
F
172 179Right-handed alpha
Helix 48
48
F
208 223Right-handed alpha
Helix 49
49
G
36 41Right-handed alpha
Helix 50
50
G
64 79Right-handed alpha
Helix 51
51
G
102 123Right-handed alpha
Helix 52
52
G
135 148Right-handed alpha
Helix 53
53
G
161 169Right-handed alpha
Helix 54
54
G
172 179Right-handed alpha
Helix 55
55
G
208 223Right-handed alpha
Helix 56
56
H
36 41Right-handed alpha
Helix 57
57
H
64 78Right-handed alpha
Helix 58
58
H
88 92Right-handed alpha
Helix 59
59
H
102 123Right-handed alpha
Helix 60
60
H
135 149Right-handed alpha
Helix 61
61
H
161 169Right-handed alpha
Helix 62
62
H
172 179Right-handed alpha
Helix 63
63
H
208 223Right-handed alpha
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There are 8 sheets in PDB entry 2OFW. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
83 87first strand
Strand 2
A
126 130parallel
Strand 3
A
53 58parallel
Strand 4
A
153 158parallel
Strand 5
A
200 202parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
83 87first strand
Strand 2
B
126 130parallel
Strand 3
B
53 58parallel
Strand 4
B
153 158parallel
Strand 5
B
200 202parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
83 87first strand
Strand 2
C
126 130parallel
Strand 3
C
53 58parallel
Strand 4
C
153 159parallel
Strand 5
C
200 203parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
83 87first strand
Strand 2
D
126 130parallel
Strand 3
D
53 58parallel
Strand 4
D
153 159parallel
Strand 5
D
200 203parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
83 87first strand
Strand 2
E
126 130parallel
Strand 3
E
53 58parallel
Strand 4
E
153 159parallel
Strand 5
E
200 203parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
83 87first strand
Strand 2
F
126 130parallel
Strand 3
F
53 58parallel
Strand 4
F
153 158parallel
Strand 5
F
200 202parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
83 87first strand
Strand 2
G
126 130parallel
Strand 3
G
53 58parallel
Strand 4
G
153 159parallel
Strand 5
G
200 203parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
83 87first strand
Strand 2
H
126 130parallel
Strand 3
H
53 58parallel
Strand 4
H
153 158parallel
Strand 5
H
200 202parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il