Analysis of interatomic Contacts of Structural Units in PDB entry:
2OFX


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2OFX entry

There are 2 chains in PDB entry 2OFX (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 HIS 23PRO 227
B
 HIS 23PRO 227
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 2OFX. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
36 44Right-handed alpha
Helix 2
2
A
64 79Right-handed alpha
Helix 3
3
A
88 92Right-handed alpha
Helix 4
4
A
102 124Right-handed alpha
Helix 5
5
A
135 149Right-handed alpha
Helix 6
6
A
161 169Right-handed alpha
Helix 7
7
A
172 179Right-handed alpha
Helix 8
8
A
208 223Right-handed alpha
Helix 9
9
B
36 45Right-handed alpha
Helix 10
10
B
64 79Right-handed alpha
Helix 11
11
B
88 92Right-handed alpha
Helix 12
12
B
102 123Right-handed alpha
Helix 13
13
B
135 149Right-handed alpha
Helix 14
14
B
161 169Right-handed alpha
Helix 15
15
B
172 180Right-handed alpha
Helix 16
16
B
208 223Right-handed alpha
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There are 2 sheets in PDB entry 2OFX. Click on sheet of interest to get list of strands forming it: A, B,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 87first strand
Strand 2
A
126 130parallel
Strand 3
A
53 58parallel
Strand 4
A
153 159parallel
Strand 5
A
200 203parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
83 87first strand
Strand 2
B
126 130parallel
Strand 3
B
53 58parallel
Strand 4
B
153 158parallel
Strand 5
B
200 202parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il