Analysis of interatomic Contacts of Structural Units in PDB entry:
2OG7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2OG7 entry

There is 1 chain in PDB entry 2OG7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 11ALA 329
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 10 helices in PDB entry 2OG7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
17 35Right-handed alpha
Helix 2
2
A
41 53Right-handed alpha
Helix 3
3
A
56 69Right-handed alpha
Helix 4
4
A
103 117Right-handed alpha
Helix 5
5
A
125 129Right-handed 310
Helix 6
6
A
188 192Right-handed alpha
Helix 7
7
A
193 195Right-handed 310
Helix 8
8
A
196 204Right-handed alpha
Helix 9
9
A
249 267Right-handed alpha
Helix 10
10
A
311 323Right-handed 310
Back to top of page

There are 5 sheets in PDB entry 2OG7. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
13 15first strand
Strand 2
A
75 79parallel
Strand 3
A
277 281anti-parallel
Strand 4
A
167 174anti-parallel
Strand 5
A
302 309anti-parallel
Strand 6
A
132 134anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
13 15first strand
Strand 2
A
75 79parallel
Strand 3
A
277 281anti-parallel
Strand 4
A
167 174anti-parallel
Strand 5
A
302 309anti-parallel
Strand 6
A
118 122anti-parallel
Strand 7
A
325 326parallel
Back to list of sheets
Back to top of page

There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
152 155first strand
Strand 2
A
285 289anti-parallel
Strand 3
A
183 187anti-parallel
Strand 4
A
268 270anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
208 210first strand
Strand 2
A
245 247anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
229 231first strand
Strand 2
A
236 238anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il