Analysis of interatomic Contacts of Structural Units in PDB entry:
2OGE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2OGE entry

There are 8 chains in PDB entry 2OGE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 8GLY 192
A
 ASN 194ARG 375
B
 PRO 8GLY 192
B
 ASN 194VAL 376
C
 PRO 8GLY 192
C
 ASN 194VAL 376
D
 PRO 8GLY 192
D
 ASN 194ARG 375
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 60 helices in PDB entry 2OGE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 22Right-handed alpha
Helix 2
2
A
22 37Right-handed alpha
Helix 3
3
A
42 56Right-handed alpha
Helix 4
4
A
66 78Right-handed alpha
Helix 5
5
A
94 103Right-handed alpha
Helix 6
6
A
120 128Right-handed alpha
Helix 7
7
A
139 143Right-handed 310
Helix 8
8
A
146 158Right-handed alpha
Helix 9
9
A
208 219Right-handed alpha
Helix 10
10
A
239 271Right-handed alpha
Helix 11
11
A
299 310Right-handed alpha
Helix 12
12
A
321 329Right-handed 310
Helix 13
13
A
338 347Right-handed alpha
Helix 14
14
A
358 374Right-handed alpha
Helix 15
15
B
14 22Right-handed alpha
Helix 16
16
B
22 37Right-handed alpha
Helix 17
17
B
42 56Right-handed alpha
Helix 18
18
B
66 78Right-handed alpha
Helix 19
19
B
94 103Right-handed alpha
Helix 20
20
B
120 125Right-handed alpha
Helix 21
21
B
126 128Right-handed 310
Helix 22
22
B
139 143Right-handed 310
Helix 23
23
B
146 158Right-handed alpha
Helix 24
24
B
208 219Right-handed alpha
Helix 25
25
B
239 271Right-handed alpha
Helix 26
26
B
299 310Right-handed alpha
Helix 27
27
B
321 324Right-handed 310
Helix 28
28
B
325 330Right-handed alpha
Helix 29
29
B
338 347Right-handed alpha
Helix 30
30
B
358 376Right-handed alpha
Helix 31
31
C
14 22Right-handed alpha
Helix 32
32
C
22 37Right-handed alpha
Helix 33
33
C
42 56Right-handed alpha
Helix 34
34
C
66 78Right-handed alpha
Helix 35
35
C
93 102Right-handed alpha
Helix 36
36
C
120 125Right-handed alpha
Helix 37
37
C
126 128Right-handed 310
Helix 38
38
C
139 143Right-handed 310
Helix 39
39
C
146 157Right-handed alpha
Helix 40
40
C
208 219Right-handed alpha
Helix 41
41
C
239 252Right-handed alpha
Helix 42
42
C
252 271Right-handed alpha
Helix 43
43
C
299 310Right-handed alpha
Helix 44
44
C
321 329Right-handed 310
Helix 45
45
C
338 347Right-handed alpha
Helix 46
46
C
358 376Right-handed alpha
Helix 47
47
D
14 22Right-handed alpha
Helix 48
48
D
22 37Right-handed alpha
Helix 49
49
D
42 56Right-handed alpha
Helix 50
50
D
66 78Right-handed alpha
Helix 51
51
D
94 103Right-handed alpha
Helix 52
52
D
120 128Right-handed alpha
Helix 53
53
D
139 143Right-handed 310
Helix 54
54
D
146 157Right-handed alpha
Helix 55
55
D
208 219Right-handed alpha
Helix 56
56
D
239 271Right-handed alpha
Helix 57
57
D
299 310Right-handed alpha
Helix 58
58
D
321 329Right-handed 310
Helix 59
59
D
338 347Right-handed alpha
Helix 60
60
D
358 375Right-handed alpha
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There are 15 sheets in PDB entry 2OGE. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
60 64first strand
Strand 2
A
202 206anti-parallel
Strand 3
A
184 188anti-parallel
Strand 4
A
160 164parallel
Strand 5
A
132 135parallel
Strand 6
A
85 89parallel
Strand 7
A
106 110parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
176 177first strand
Strand 2
A
172 173anti-parallel
Strand 3
A
286 287anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
293 296first strand
Strand 2
A
348 351anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
60 64first strand
Strand 2
B
202 206anti-parallel
Strand 3
B
184 188anti-parallel
Strand 4
B
163 164parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
106 110first strand
Strand 2
B
85 89parallel
Strand 3
B
132 135parallel
Strand 4
B
160 161parallel
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There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
176 177first strand
Strand 2
B
172 173anti-parallel
Strand 3
B
286 287anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
293 296first strand
Strand 2
B
348 351anti-parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
60 64first strand
Strand 2
C
202 206anti-parallel
Strand 3
C
184 188anti-parallel
Strand 4
C
163 164parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
106 110first strand
Strand 2
C
85 89parallel
Strand 3
C
132 135parallel
Strand 4
C
160 161parallel
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There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
176 177first strand
Strand 2
C
172 173anti-parallel
Strand 3
C
286 287anti-parallel
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There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
293 296first strand
Strand 2
C
348 351anti-parallel
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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
60 64first strand
Strand 2
D
202 206anti-parallel
Strand 3
D
184 188anti-parallel
Strand 4
D
163 164parallel
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There are 4 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
106 110first strand
Strand 2
D
85 89parallel
Strand 3
D
132 135parallel
Strand 4
D
160 161parallel
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There are 3 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
176 177first strand
Strand 2
D
172 173anti-parallel
Strand 3
D
286 287anti-parallel
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There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
293 296first strand
Strand 2
D
348 351anti-parallel
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