Analysis of interatomic Contacts of Structural Units in PDB entry:
2OHJ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2OHJ entry

There are 4 chains in PDB entry 2OHJ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1ARG 403
B
 MET 1ARG 403
D
 MET 1ARG 403
E
 MET 1ARG 403
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 63 helices in PDB entry 2OHJ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
56 72Right-handed alpha
Helix 2
2
A
85 90Right-handed alpha
Helix 3
3
A
91 99Right-handed alpha
Helix 4
4
A
107 118Right-handed alpha
Helix 5
5
A
119 123Right-handed 310
Helix 6
6
A
182 186Right-handed 310
Helix 7
7
A
187 203Right-handed alpha
Helix 8
8
A
206 220Right-handed alpha
Helix 9
9
A
222 226Right-handed 310
Helix 10
10
A
239 253Right-handed alpha
Helix 11
11
A
268 283Right-handed alpha
Helix 12
12
A
297 307Right-handed alpha
Helix 13
13
A
324 337Right-handed alpha
Helix 14
14
A
338 341Right-handed 310
Helix 15
15
A
357 369Right-handed alpha
Helix 16
16
A
384 402Right-handed alpha
Helix 17
17
B
56 72Right-handed alpha
Helix 18
18
B
85 90Right-handed alpha
Helix 19
19
B
91 99Right-handed alpha
Helix 20
20
B
107 118Right-handed alpha
Helix 21
21
B
119 124Right-handed 310
Helix 22
22
B
182 186Right-handed 310
Helix 23
23
B
187 203Right-handed alpha
Helix 24
24
B
206 220Right-handed alpha
Helix 25
25
B
222 226Right-handed 310
Helix 26
26
B
239 252Right-handed alpha
Helix 27
27
B
268 284Right-handed alpha
Helix 28
28
B
297 307Right-handed alpha
Helix 29
29
B
324 337Right-handed alpha
Helix 30
30
B
338 341Right-handed 310
Helix 31
31
B
357 369Right-handed alpha
Helix 32
32
B
384 403Right-handed alpha
Helix 33
33
D
56 72Right-handed alpha
Helix 34
34
D
85 90Right-handed alpha
Helix 35
35
D
91 99Right-handed alpha
Helix 36
36
D
107 118Right-handed alpha
Helix 37
37
D
119 124Right-handed 310
Helix 38
38
D
182 186Right-handed 310
Helix 39
39
D
187 203Right-handed alpha
Helix 40
40
D
206 220Right-handed alpha
Helix 41
41
D
239 253Right-handed alpha
Helix 42
42
D
268 283Right-handed alpha
Helix 43
43
D
297 307Right-handed alpha
Helix 44
44
D
324 337Right-handed alpha
Helix 45
45
D
338 341Right-handed 310
Helix 46
46
D
357 369Right-handed alpha
Helix 47
47
D
384 403Right-handed alpha
Helix 48
48
E
56 72Right-handed alpha
Helix 49
49
E
85 90Right-handed alpha
Helix 50
50
E
91 99Right-handed alpha
Helix 51
51
E
108 118Right-handed alpha
Helix 52
52
E
119 124Right-handed 310
Helix 53
53
E
182 186Right-handed 310
Helix 54
54
E
187 203Right-handed alpha
Helix 55
55
E
206 220Right-handed alpha
Helix 56
56
E
222 226Right-handed 310
Helix 57
57
E
239 252Right-handed alpha
Helix 58
58
E
268 283Right-handed alpha
Helix 59
59
E
297 307Right-handed alpha
Helix 60
60
E
324 337Right-handed alpha
Helix 61
61
E
338 341Right-handed 310
Helix 62
62
E
357 369Right-handed alpha
Helix 63
63
E
384 403Right-handed alpha
Back to top of page

There are 24 sheets in PDB entry 2OHJ. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
6 9first strand
Strand 2
A
12 14anti-parallel
Strand 3
A
38 41anti-parallel
Strand 4
A
46 49anti-parallel
Strand 5
A
78 80parallel
Strand 6
A
104 106parallel
Strand 7
A
126 128parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
17 19first strand
Strand 2
A
33 35anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 25first strand
Strand 2
A
28 29anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
134 136first strand
Strand 2
A
141 146anti-parallel
Strand 3
A
156 160anti-parallel
Strand 4
A
165 167anti-parallel
Strand 5
A
228 230parallel
Back to list of sheets
Back to top of page

There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
287 292first strand
Strand 2
A
258 263parallel
Strand 3
A
310 314parallel
Strand 4
A
345 352parallel
Strand 5
A
372 380parallel
Back to list of sheets
Back to top of page

There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
317 318first strand
Strand 2
A
321 322anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
6 9first strand
Strand 2
B
12 14anti-parallel
Strand 3
B
38 41anti-parallel
Strand 4
B
46 49anti-parallel
Strand 5
B
78 80parallel
Strand 6
B
104 106parallel
Strand 7
B
126 128parallel
Back to list of sheets
Back to top of page

There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
17 19first strand
Strand 2
B
33 35anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
24 25first strand
Strand 2
B
28 29anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
134 136first strand
Strand 2
B
141 146anti-parallel
Strand 3
B
156 160anti-parallel
Strand 4
B
165 167anti-parallel
Strand 5
B
228 230parallel
Back to list of sheets
Back to top of page

There are 5 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
287 292first strand
Strand 2
B
258 263parallel
Strand 3
B
310 314parallel
Strand 4
B
345 352parallel
Strand 5
B
372 380parallel
Back to list of sheets
Back to top of page

There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
317 318first strand
Strand 2
B
321 322anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
6 9first strand
Strand 2
D
12 14anti-parallel
Strand 3
D
38 41anti-parallel
Strand 4
D
46 49anti-parallel
Strand 5
D
78 80parallel
Strand 6
D
104 106parallel
Strand 7
D
126 128parallel
Back to list of sheets
Back to top of page

There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
17 19first strand
Strand 2
D
33 35anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
24 25first strand
Strand 2
D
28 29anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
134 136first strand
Strand 2
D
141 146anti-parallel
Strand 3
D
156 160anti-parallel
Strand 4
D
165 167anti-parallel
Strand 5
D
228 230parallel
Back to list of sheets
Back to top of page

There are 5 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
287 292first strand
Strand 2
D
258 263parallel
Strand 3
D
310 314parallel
Strand 4
D
345 352parallel
Strand 5
D
372 380parallel
Back to list of sheets
Back to top of page

There are 2 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
317 318first strand
Strand 2
D
321 322anti-parallel
Back to list of sheets
Back to top of page

There are 7 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
6 9first strand
Strand 2
E
12 14anti-parallel
Strand 3
E
38 41anti-parallel
Strand 4
E
46 49anti-parallel
Strand 5
E
78 80parallel
Strand 6
E
104 107parallel
Strand 7
E
126 129parallel
Back to list of sheets
Back to top of page

There are 2 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
17 19first strand
Strand 2
E
33 35anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
24 25first strand
Strand 2
E
28 29anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in V sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
134 136first strand
Strand 2
E
141 146anti-parallel
Strand 3
E
156 160anti-parallel
Strand 4
E
165 167anti-parallel
Strand 5
E
228 230parallel
Back to list of sheets
Back to top of page

There are 5 strands in W sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
287 292first strand
Strand 2
E
258 263parallel
Strand 3
E
310 314parallel
Strand 4
E
345 352parallel
Strand 5
E
372 380parallel
Back to list of sheets
Back to top of page

There are 2 strands in X sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
317 318first strand
Strand 2
E
321 322anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il