Analysis of interatomic Contacts of Structural Units in PDB entry:
2OHO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2OHO entry

There are 2 chains in PDB entry 2OHO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY -8LEU 264
B
 MET 1LEU 264
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 25 helices in PDB entry 2OHO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
15 26Right-handed alpha
Helix 2
2
A
37 40Right-handed 310
Helix 3
3
A
46 63Right-handed alpha
Helix 4
4
A
73 88Right-handed alpha
Helix 5
5
A
95 107Right-handed alpha
Helix 6
6
A
117 124Right-handed alpha
Helix 7
7
A
124 134Right-handed alpha
Helix 8
8
A
146 152Right-handed alpha
Helix 9
9
A
158 170Right-handed alpha
Helix 10
10
A
185 188Right-handed 310
Helix 11
11
A
189 198Right-handed alpha
Helix 12
12
A
206 221Right-handed alpha
Helix 13
13
A
241 253Right-handed alpha
Helix 14
14
B
15 26Right-handed alpha
Helix 15
15
B
46 64Right-handed alpha
Helix 16
16
B
73 88Right-handed alpha
Helix 17
17
B
95 107Right-handed alpha
Helix 18
18
B
117 124Right-handed alpha
Helix 19
19
B
124 134Right-handed alpha
Helix 20
20
B
152 156Right-handed 310
Helix 21
21
B
157 170Right-handed alpha
Helix 22
22
B
185 188Right-handed 310
Helix 23
23
B
189 197Right-handed alpha
Helix 24
24
B
205 221Right-handed alpha
Helix 25
25
B
241 253Right-handed alpha
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There are 4 sheets in PDB entry 2OHO. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
92 94first strand
Strand 2
A
68 71parallel
Strand 3
A
6 10parallel
Strand 4
A
31 35parallel
Strand 5
A
235 238parallel
Strand 6
A
259 261parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
138 143first strand
Strand 2
A
111 116parallel
Strand 3
A
178 181parallel
Strand 4
A
202 205parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
92 94first strand
Strand 2
B
68 71parallel
Strand 3
B
6 9parallel
Strand 4
B
31 35parallel
Strand 5
B
235 238parallel
Strand 6
B
259 261parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
138 143first strand
Strand 2
B
111 116parallel
Strand 3
B
178 181parallel
Strand 4
B
202 204parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il