Analysis of interatomic Contacts of Structural Units in PDB entry:
2OII


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2OII entry

There are 3 chains in PDB entry 2OII (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 846ALA 995
B
 PRO 846ALA 995
C
 PRO 846ALA 995
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are no helices in PDB entry 2OII

There are 7 sheets in PDB entry 2OII. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
870 873first strand
Strand 2
A
851 855anti-parallel
Strand 3
A
981 988anti-parallel
Strand 4
A
892 898anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
879 880first strand
Strand 2
A
885 887anti-parallel
Strand 3
A
961 965anti-parallel
Strand 4
A
909 912anti-parallel
Strand 5
A
923 924anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
870 873first strand
Strand 2
B
851 855anti-parallel
Strand 3
B
981 988anti-parallel
Strand 4
B
892 898anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
879 880first strand
Strand 2
B
885 887anti-parallel
Strand 3
B
961 965anti-parallel
Strand 4
B
909 912anti-parallel
Strand 5
B
923 924anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
870 871first strand
Strand 2
C
851 855anti-parallel
Strand 3
C
981 988anti-parallel
Strand 4
C
892 898anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
879 880first strand
Strand 2
C
885 886anti-parallel
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There are 3 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
923 925first strand
Strand 2
C
908 912anti-parallel
Strand 3
C
963 965anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il