Analysis of interatomic Contacts of Structural Units in PDB entry:
2OKI


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2OKI entry

There are 2 chains in PDB entry 2OKI (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 94SER 229
B
 LEU 96ALA 227
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 2 helices in PDB entry 2OKI. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
141 159Right-handed alpha
Helix 2
2
B
141 158Right-handed alpha
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There is 1 sheet ( A) in PDB entry 2OKI.

There are 12 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
107 112first strand
Strand 2
A
116 122anti-parallel
Strand 3
A
188 197anti-parallel
Strand 4
A
206 213anti-parallel
Strand 5
A
216 228anti-parallel
Strand 6
A
169 178anti-parallel
Strand 7
B
170 179anti-parallel
Strand 8
B
216 227anti-parallel
Strand 9
B
204 213anti-parallel
Strand 10
B
188 199anti-parallel
Strand 11
B
116 122anti-parallel
Strand 12
B
107 108anti-parallel
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