Analysis of interatomic Contacts of Structural Units in PDB entry:
2OKU


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2OKU entry

There are 2 chains in PDB entry 2OKU (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 443THR 564
B
 VAL 445PRO 560
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 16 helices in PDB entry 2OKU. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
443 448Right-handed alpha
Helix 2
2
A
448 454Right-handed alpha
Helix 3
3
A
454 463Right-handed alpha
Helix 4
4
A
464 467Right-handed 310
Helix 5
5
A
470 472Right-handed 310
Helix 6
6
A
473 496Right-handed alpha
Helix 7
7
A
499 530Right-handed alpha
Helix 8
8
A
533 558Right-handed alpha
Helix 9
9
A
559 563Right-handed 310
Helix 10
10
B
445 454Right-handed alpha
Helix 11
11
B
454 463Right-handed alpha
Helix 12
12
B
464 467Right-handed 310
Helix 13
13
B
470 472Right-handed 310
Helix 14
14
B
473 496Right-handed alpha
Helix 15
15
B
499 530Right-handed alpha
Helix 16
16
B
533 558Right-handed alpha
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There are no sheets in PDB entry 2OKU
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il