Analysis of interatomic Contacts of Structural Units in PDB entry:
2OM6


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2OM6 entry

There are 2 chains in PDB entry 2OM6 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1SER 233
B
 MSE 1SER 233
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 29 helices in PDB entry 2OM6. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
17 34Right-handed alpha
Helix 2
2
A
36 57Right-handed alpha
Helix 3
3
A
64 78Right-handed alpha
Helix 4
4
A
80 95Right-handed alpha
Helix 5
5
A
96 100Right-handed 310
Helix 6
6
A
103 114Right-handed alpha
Helix 7
7
A
128 139Right-handed alpha
Helix 8
8
A
141 145Right-handed 310
Helix 9
9
A
151 155Right-handed alpha
Helix 10
10
A
160 171Right-handed alpha
Helix 11
11
A
174 176Right-handed 310
Helix 12
12
A
188 195Right-handed alpha
Helix 13
13
A
221 223Right-handed 310
Helix 14
14
A
224 232Right-handed alpha
Helix 15
15
B
17 34Right-handed alpha
Helix 16
16
B
36 57Right-handed alpha
Helix 17
17
B
61 65Right-handed 310
Helix 18
18
B
66 78Right-handed alpha
Helix 19
19
B
80 95Right-handed alpha
Helix 20
20
B
96 100Right-handed 310
Helix 21
21
B
103 114Right-handed alpha
Helix 22
22
B
128 139Right-handed alpha
Helix 23
23
B
140 145Right-handed 310
Helix 24
24
B
151 155Right-handed alpha
Helix 25
25
B
160 171Right-handed alpha
Helix 26
26
B
174 176Right-handed 310
Helix 27
27
B
188 195Right-handed alpha
Helix 28
28
B
221 223Right-handed 310
Helix 29
29
B
224 232Right-handed alpha
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There are 2 sheets in PDB entry 2OM6. Click on sheet of interest to get list of strands forming it: A, B,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
147 150first strand
Strand 2
A
117 122parallel
Strand 3
A
6 9parallel
Strand 4
A
178 182parallel
Strand 5
A
198 202parallel
Strand 6
A
216 219parallel
Strand 7
A
210 213anti-parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
147 150first strand
Strand 2
B
117 122parallel
Strand 3
B
6 9parallel
Strand 4
B
178 182parallel
Strand 5
B
198 202parallel
Strand 6
B
216 219parallel
Strand 7
B
210 213anti-parallel
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