Analysis of interatomic Contacts of Structural Units in PDB entry:
2OND


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2OND entry

There are 2 chains in PDB entry 2OND (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 242VAL 549
B
 THR 242VAL 549
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 2OND. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
242 261Right-handed alpha
Helix 2
2
A
268 288Right-handed alpha
Helix 3
3
A
290 311Right-handed alpha
Helix 4
4
A
314 333Right-handed alpha
Helix 5
5
A
339 353Right-handed alpha
Helix 6
6
A
355 368Right-handed alpha
Helix 7
7
A
374 390Right-handed alpha
Helix 8
8
A
390 403Right-handed alpha
Helix 9
9
A
409 422Right-handed alpha
Helix 10
10
A
425 441Right-handed alpha
Helix 11
11
A
443 456Right-handed alpha
Helix 12
12
A
459 473Right-handed alpha
Helix 13
13
A
477 480Right-handed 310
Helix 14
14
A
481 496Right-handed alpha
Helix 15
15
A
497 512Right-handed alpha
Helix 16
16
A
519 526Right-handed alpha
Helix 17
17
A
537 543Right-handed alpha
Helix 18
18
B
242 261Right-handed alpha
Helix 19
19
B
268 288Right-handed alpha
Helix 20
20
B
290 310Right-handed alpha
Helix 21
21
B
313 334Right-handed alpha
Helix 22
22
B
339 353Right-handed alpha
Helix 23
23
B
355 368Right-handed alpha
Helix 24
24
B
374 390Right-handed alpha
Helix 25
25
B
390 404Right-handed alpha
Helix 26
26
B
409 422Right-handed alpha
Helix 27
27
B
425 441Right-handed alpha
Helix 28
28
B
443 456Right-handed alpha
Helix 29
29
B
459 473Right-handed alpha
Helix 30
30
B
477 480Right-handed 310
Helix 31
31
B
481 496Right-handed alpha
Helix 32
32
B
497 511Right-handed alpha
Helix 33
33
B
519 529Right-handed alpha
Helix 34
34
B
537 544Right-handed alpha
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There are no sheets in PDB entry 2OND
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il