Analysis of interatomic Contacts of Structural Units in PDB entry:
2OOE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2OOE entry

There is 1 chain in PDB entry 2OOE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 20VAL 549
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 30 helices in PDB entry 2OOE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
20 28Right-handed alpha
Helix 2
2
A
31 44Right-handed alpha
Helix 3
3
A
46 59Right-handed alpha
Helix 4
4
A
64 78Right-handed alpha
Helix 5
5
A
80 92Right-handed alpha
Helix 6
6
A
97 112Right-handed alpha
Helix 7
7
A
117 133Right-handed alpha
Helix 8
8
A
139 153Right-handed alpha
Helix 9
9
A
160 176Right-handed alpha
Helix 10
10
A
182 198Right-handed alpha
Helix 11
11
A
198 208Right-handed alpha
Helix 12
12
A
209 230Right-handed alpha
Helix 13
13
A
244 262Right-handed alpha
Helix 14
14
A
269 288Right-handed alpha
Helix 15
15
A
290 310Right-handed alpha
Helix 16
16
A
314 332Right-handed alpha
Helix 17
17
A
339 353Right-handed alpha
Helix 18
18
A
355 369Right-handed alpha
Helix 19
19
A
373 403Right-handed alpha
Helix 20
20
A
409 423Right-handed alpha
Helix 21
21
A
425 441Right-handed alpha
Helix 22
22
A
443 455Right-handed alpha
Helix 23
23
A
459 473Right-handed alpha
Helix 24
24
A
477 480Right-handed 310
Helix 25
25
A
481 495Right-handed alpha
Helix 26
26
A
497 512Right-handed alpha
Helix 27
27
A
512 517Right-handed alpha
Helix 28
28
A
519 525Right-handed alpha
Helix 29
29
A
526 528Right-handed 310
Helix 30
30
A
537 543Right-handed alpha
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There are no sheets in PDB entry 2OOE
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il