Analysis of interatomic Contacts of Structural Units in PDB entry:
2OOG


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2OOG entry

There are 6 chains in PDB entry 2OOG (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 44GLU 310
B
 GLN 44GLU 310
C
 GLN 44GLU 310
D
 GLN 44GLY 311
E
 GLN 44GLU 310
F
 GLN 44GLU 310
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 87 helices in PDB entry 2OOG. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
70 80Right-handed alpha
Helix 2
2
A
115 119Right-handed 310
Helix 3
3
A
120 125Right-handed alpha
Helix 4
4
A
130 137Right-handed alpha
Helix 5
5
A
138 141Right-handed 310
Helix 6
6
A
142 146Right-handed 310
Helix 7
7
A
152 161Right-handed alpha
Helix 8
8
A
178 190Right-handed alpha
Helix 9
9
A
194 200Right-handed alpha
Helix 10
10
A
209 220Right-handed alpha
Helix 11
11
A
233 237Right-handed 310
Helix 12
12
A
238 247Right-handed alpha
Helix 13
13
A
256 259Right-handed 310
Helix 14
14
A
260 270Right-handed alpha
Helix 15
15
A
281 292Right-handed alpha
Helix 16
16
A
300 310Right-handed alpha
Helix 17
17
B
70 80Right-handed alpha
Helix 18
18
B
115 119Right-handed 310
Helix 19
19
B
120 125Right-handed alpha
Helix 20
20
B
130 137Right-handed alpha
Helix 21
21
B
142 146Right-handed 310
Helix 22
22
B
152 161Right-handed alpha
Helix 23
23
B
178 190Right-handed alpha
Helix 24
24
B
194 200Right-handed alpha
Helix 25
25
B
209 220Right-handed alpha
Helix 26
26
B
233 237Right-handed 310
Helix 27
27
B
238 247Right-handed alpha
Helix 28
28
B
256 259Right-handed 310
Helix 29
29
B
260 270Right-handed alpha
Helix 30
30
B
281 292Right-handed alpha
Helix 31
31
B
300 310Right-handed alpha
Helix 32
32
C
70 79Right-handed alpha
Helix 33
33
C
115 119Right-handed 310
Helix 34
34
C
120 125Right-handed alpha
Helix 35
35
C
130 137Right-handed alpha
Helix 36
36
C
152 161Right-handed alpha
Helix 37
37
C
178 190Right-handed alpha
Helix 38
38
C
194 199Right-handed alpha
Helix 39
39
C
209 220Right-handed alpha
Helix 40
40
C
238 247Right-handed alpha
Helix 41
41
C
255 259Right-handed 310
Helix 42
42
C
260 270Right-handed alpha
Helix 43
43
C
281 292Right-handed alpha
Helix 44
44
C
300 310Right-handed alpha
Helix 45
45
D
70 79Right-handed alpha
Helix 46
46
D
115 119Right-handed 310
Helix 47
47
D
120 125Right-handed alpha
Helix 48
48
D
130 137Right-handed alpha
Helix 49
49
D
142 146Right-handed 310
Helix 50
50
D
152 161Right-handed alpha
Helix 51
51
D
178 190Right-handed alpha
Helix 52
52
D
194 200Right-handed alpha
Helix 53
53
D
209 220Right-handed alpha
Helix 54
54
D
238 247Right-handed alpha
Helix 55
55
D
255 259Right-handed 310
Helix 56
56
D
260 270Right-handed alpha
Helix 57
57
D
281 292Right-handed alpha
Helix 58
58
D
300 311Right-handed alpha
Helix 59
59
E
70 79Right-handed alpha
Helix 60
60
E
115 119Right-handed 310
Helix 61
61
E
120 126Right-handed alpha
Helix 62
62
E
130 137Right-handed alpha
Helix 63
63
E
142 146Right-handed 310
Helix 64
64
E
152 161Right-handed alpha
Helix 65
65
E
178 190Right-handed alpha
Helix 66
66
E
194 200Right-handed alpha
Helix 67
67
E
209 220Right-handed alpha
Helix 68
68
E
238 247Right-handed alpha
Helix 69
69
E
255 259Right-handed 310
Helix 70
70
E
260 270Right-handed alpha
Helix 71
71
E
281 292Right-handed alpha
Helix 72
72
E
300 310Right-handed alpha
Helix 73
73
F
70 80Right-handed alpha
Helix 74
74
F
115 119Right-handed 310
Helix 75
75
F
120 125Right-handed alpha
Helix 76
76
F
130 137Right-handed alpha
Helix 77
77
F
138 141Right-handed 310
Helix 78
78
F
142 146Right-handed 310
Helix 79
79
F
152 161Right-handed alpha
Helix 80
80
F
178 190Right-handed alpha
Helix 81
81
F
194 200Right-handed alpha
Helix 82
82
F
209 220Right-handed alpha
Helix 83
83
F
239 247Right-handed alpha
Helix 84
84
F
255 259Right-handed 310
Helix 85
85
F
260 270Right-handed alpha
Helix 86
86
F
281 292Right-handed alpha
Helix 87
87
F
300 310Right-handed alpha
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There are 12 sheets in PDB entry 2OOG. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
98 100first strand
Strand 2
A
85 92anti-parallel
Strand 3
A
166 169parallel
Strand 4
A
203 207parallel
Strand 5
A
225 229parallel
Strand 6
A
251 254parallel
Strand 7
A
273 274parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
98 100first strand
Strand 2
A
85 92anti-parallel
Strand 3
A
55 58parallel
Strand 4
A
295 298parallel
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There are 7 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
98 100first strand
Strand 2
B
85 92anti-parallel
Strand 3
B
166 169parallel
Strand 4
B
203 207parallel
Strand 5
B
225 229parallel
Strand 6
B
251 254parallel
Strand 7
B
273 274parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
98 100first strand
Strand 2
B
85 92anti-parallel
Strand 3
B
55 58parallel
Strand 4
B
295 298parallel
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There are 7 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
98 100first strand
Strand 2
C
85 92anti-parallel
Strand 3
C
165 169parallel
Strand 4
C
203 207parallel
Strand 5
C
225 228parallel
Strand 6
C
251 253parallel
Strand 7
C
273 274parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
98 100first strand
Strand 2
C
85 92anti-parallel
Strand 3
C
55 58parallel
Strand 4
C
295 298parallel
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There are 7 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
98 100first strand
Strand 2
D
85 92anti-parallel
Strand 3
D
166 169parallel
Strand 4
D
203 207parallel
Strand 5
D
225 228parallel
Strand 6
D
251 253parallel
Strand 7
D
273 274parallel
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There are 4 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
98 100first strand
Strand 2
D
85 92anti-parallel
Strand 3
D
55 58parallel
Strand 4
D
295 298parallel
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There are 7 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
98 100first strand
Strand 2
E
85 92anti-parallel
Strand 3
E
166 169parallel
Strand 4
E
203 207parallel
Strand 5
E
225 228parallel
Strand 6
E
251 253parallel
Strand 7
E
273 274parallel
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There are 4 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
98 100first strand
Strand 2
E
85 92anti-parallel
Strand 3
E
55 58parallel
Strand 4
E
295 298parallel
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There are 7 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
98 100first strand
Strand 2
F
85 92anti-parallel
Strand 3
F
166 169parallel
Strand 4
F
203 207parallel
Strand 5
F
225 228parallel
Strand 6
F
251 253parallel
Strand 7
F
273 274parallel
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There are 4 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
98 100first strand
Strand 2
F
85 92anti-parallel
Strand 3
F
55 58parallel
Strand 4
F
295 298parallel
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