Analysis of interatomic Contacts of Structural Units in PDB entry:
2OR0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2OR0 entry

There are 2 chains in PDB entry 2OR0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 2ILE 391
B
 SER -17ILE 391
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 50 helices in PDB entry 2OR0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
2 11Right-handed alpha
Helix 2
2
A
11 26Right-handed alpha
Helix 3
3
A
29 40Right-handed alpha
Helix 4
4
A
41 44Right-handed 310
Helix 5
5
A
47 51Right-handed 310
Helix 6
6
A
56 71Right-handed alpha
Helix 7
7
A
71 82Right-handed alpha
Helix 8
8
A
83 89Right-handed alpha
Helix 9
9
A
92 101Right-handed alpha
Helix 10
10
A
136 140Right-handed 310
Helix 11
11
A
169 171Right-handed 310
Helix 12
12
A
183 187Right-handed 310
Helix 13
13
A
206 212Right-handed alpha
Helix 14
14
A
212 219Right-handed alpha
Helix 15
15
A
223 227Right-handed 310
Helix 16
16
A
228 257Right-handed alpha
Helix 17
17
A
266 269Right-handed 310
Helix 18
18
A
270 304Right-handed alpha
Helix 19
19
A
309 336Right-handed alpha
Helix 20
20
A
337 338Right-handed 310
Helix 21
21
A
339 344Right-handed 310
Helix 22
22
A
348 361Right-handed alpha
Helix 23
23
A
362 366Right-handed 310
Helix 24
24
A
367 379Right-handed alpha
Helix 25
25
A
384 389Right-handed 310
Helix 26
26
B
-1 1Right-handed 310
Helix 27
27
B
3 11Right-handed alpha
Helix 28
28
B
11 26Right-handed alpha
Helix 29
29
B
29 40Right-handed alpha
Helix 30
30
B
41 44Right-handed 310
Helix 31
31
B
47 51Right-handed 310
Helix 32
32
B
56 71Right-handed alpha
Helix 33
33
B
71 82Right-handed alpha
Helix 34
34
B
83 89Right-handed alpha
Helix 35
35
B
92 101Right-handed alpha
Helix 36
36
B
136 140Right-handed 310
Helix 37
37
B
169 171Right-handed 310
Helix 38
38
B
183 187Right-handed 310
Helix 39
39
B
206 212Right-handed alpha
Helix 40
40
B
212 219Right-handed alpha
Helix 41
41
B
222 227Right-handed 310
Helix 42
42
B
228 264Right-handed alpha
Helix 43
43
B
270 304Right-handed alpha
Helix 44
44
B
309 336Right-handed alpha
Helix 45
45
B
337 338Right-handed 310
Helix 46
46
B
339 344Right-handed 310
Helix 47
47
B
348 361Right-handed alpha
Helix 48
48
B
362 366Right-handed 310
Helix 49
49
B
367 379Right-handed alpha
Helix 50
50
B
384 389Right-handed 310
Back to top of page

There are 5 sheets in PDB entry 2OR0. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
108 109first strand
Strand 2
A
142 149parallel
Strand 3
A
116 121parallel
Strand 4
A
124 134anti-parallel
Strand 5
A
189 199anti-parallel
Strand 6
A
172 174anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
108 109first strand
Strand 2
A
142 149parallel
Strand 3
A
161 167anti-parallel
Strand 4
A
203 205anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
-11 -10first strand
Strand 2
B
-4 -3anti-parallel
Back to list of sheets
Back to top of page

There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
108 109first strand
Strand 2
B
142 149parallel
Strand 3
B
116 121parallel
Strand 4
B
124 134anti-parallel
Strand 5
B
189 199anti-parallel
Strand 6
B
172 174anti-parallel
Back to list of sheets
Back to top of page

There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
108 109first strand
Strand 2
B
142 149parallel
Strand 3
B
161 167anti-parallel
Strand 4
B
203 205anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il