Analysis of interatomic Contacts of Structural Units in PDB entry:
2OT9


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2OT9 entry

There is 1 chain in PDB entry 2OT9 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 2GLY 180
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 2OT9. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
36 50Right-handed alpha
Helix 2
2
A
59 63Right-handed 310
Helix 3
3
A
88 97Right-handed alpha
Helix 4
4
A
110 118Right-handed alpha
Helix 5
5
A
119 121Right-handed 310
Helix 6
6
A
133 142Right-handed alpha
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There are 2 sheets in PDB entry 2OT9. Click on sheet of interest to get list of strands forming it: A, B,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
21 31first strand
Strand 2
A
6 16anti-parallel
Strand 3
A
147 155parallel
Strand 4
A
158 163anti-parallel
Strand 5
A
166 170anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
55 57first strand
Strand 2
A
69 72anti-parallel
Strand 3
A
78 84anti-parallel
Strand 4
A
99 106parallel
Strand 5
A
127 131parallel
Strand 6
A
173 176anti-parallel
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