Analysis of interatomic Contacts of Structural Units in PDB entry:
2OTC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2OTC entry

There are 9 chains in PDB entry 2OTC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 1LYS 333
B
 SER 1LYS 333
C
 SER 1LYS 333
D
 SER 1LYS 333
E
 SER 1LYS 333
F
 SER 1LYS 333
G
 SER 1LYS 333
H
 SER 1LYS 333
I
 SER 1LYS 333
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are153 helices in PDB entry 2OTC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 13Right-handed 310
Helix 2
2
A
16 35Right-handed alpha
Helix 3
3
A
57 68Right-handed alpha
Helix 4
4
A
82 84Right-handed 310
Helix 5
5
A
89 99Right-handed alpha
Helix 6
6
A
110 120Right-handed alpha
Helix 7
7
A
134 147Right-handed alpha
Helix 8
8
A
153 155Right-handed 310
Helix 9
9
A
167 179Right-handed alpha
Helix 10
10
A
189 191Right-handed 310
Helix 11
11
A
195 208Right-handed alpha
Helix 12
12
A
218 222Right-handed alpha
Helix 13
13
A
240 253Right-handed 310
Helix 14
14
A
257 262Right-handed alpha
Helix 15
15
A
283 291Right-handed alpha
Helix 16
16
A
302 305Right-handed alpha
Helix 17
17
A
312 331Right-handed alpha
Helix 18
18
B
11 13Right-handed 310
Helix 19
19
B
16 35Right-handed alpha
Helix 20
20
B
57 68Right-handed alpha
Helix 21
21
B
82 84Right-handed 310
Helix 22
22
B
89 99Right-handed alpha
Helix 23
23
B
110 120Right-handed alpha
Helix 24
24
B
134 147Right-handed alpha
Helix 25
25
B
153 155Right-handed 310
Helix 26
26
B
167 179Right-handed alpha
Helix 27
27
B
189 191Right-handed 310
Helix 28
28
B
195 208Right-handed alpha
Helix 29
29
B
218 222Right-handed alpha
Helix 30
30
B
240 253Right-handed 310
Helix 31
31
B
257 262Right-handed alpha
Helix 32
32
B
283 291Right-handed alpha
Helix 33
33
B
302 305Right-handed alpha
Helix 34
34
B
312 331Right-handed alpha
Helix 35
35
C
11 13Right-handed 310
Helix 36
36
C
16 35Right-handed alpha
Helix 37
37
C
57 68Right-handed alpha
Helix 38
38
C
82 84Right-handed 310
Helix 39
39
C
89 99Right-handed alpha
Helix 40
40
C
110 120Right-handed alpha
Helix 41
41
C
134 147Right-handed alpha
Helix 42
42
C
153 155Right-handed 310
Helix 43
43
C
167 179Right-handed alpha
Helix 44
44
C
189 191Right-handed 310
Helix 45
45
C
195 208Right-handed alpha
Helix 46
46
C
218 222Right-handed alpha
Helix 47
47
C
240 253Right-handed 310
Helix 48
48
C
257 262Right-handed alpha
Helix 49
49
C
283 291Right-handed alpha
Helix 50
50
C
302 305Right-handed alpha
Helix 51
51
C
312 331Right-handed alpha
Helix 52
52
D
11 13Right-handed 310
Helix 53
53
D
16 35Right-handed alpha
Helix 54
54
D
57 68Right-handed alpha
Helix 55
55
D
82 84Right-handed 310
Helix 56
56
D
89 99Right-handed alpha
Helix 57
57
D
110 120Right-handed alpha
Helix 58
58
D
134 147Right-handed alpha
Helix 59
59
D
153 155Right-handed 310
Helix 60
60
D
167 179Right-handed alpha
Helix 61
61
D
189 191Right-handed 310
Helix 62
62
D
195 208Right-handed alpha
Helix 63
63
D
218 222Right-handed alpha
Helix 64
64
D
240 253Right-handed 310
Helix 65
65
D
257 262Right-handed alpha
Helix 66
66
D
283 291Right-handed alpha
Helix 67
67
D
302 305Right-handed alpha
Helix 68
68
D
312 331Right-handed alpha
Helix 69
69
E
11 13Right-handed 310
Helix 70
70
E
16 35Right-handed alpha
Helix 71
71
E
57 68Right-handed alpha
Helix 72
72
E
82 84Right-handed 310
Helix 73
73
E
89 99Right-handed alpha
Helix 74
74
E
110 120Right-handed alpha
Helix 75
75
E
134 147Right-handed alpha
Helix 76
76
E
153 155Right-handed 310
Helix 77
77
E
167 179Right-handed alpha
Helix 78
78
E
189 191Right-handed 310
Helix 79
79
E
195 208Right-handed alpha
Helix 80
80
E
218 222Right-handed alpha
Helix 81
81
E
240 253Right-handed 310
Helix 82
82
E
257 262Right-handed alpha
Helix 83
83
E
283 291Right-handed alpha
Helix 84
84
E
302 305Right-handed alpha
Helix 85
85
E
312 331Right-handed alpha
Helix 86
86
F
11 13Right-handed 310
Helix 87
87
F
16 35Right-handed alpha
Helix 88
88
F
57 68Right-handed alpha
Helix 89
89
F
82 84Right-handed 310
Helix 90
90
F
89 99Right-handed alpha
Helix 91
91
F
110 120Right-handed alpha
Helix 92
92
F
134 147Right-handed alpha
Helix 93
93
F
153 155Right-handed 310
Helix 94
94
F
167 179Right-handed alpha
Helix 95
95
F
189 191Right-handed 310
Helix 96
96
F
195 208Right-handed alpha
Helix 97
97
F
218 222Right-handed alpha
Helix 98
98
F
240 253Right-handed 310
Helix 99
99
F
257 262Right-handed alpha
Helix 100
100
F
283 291Right-handed alpha
Helix 101
101
F
302 305Right-handed alpha
Helix 102
102
F
312 331Right-handed alpha
Helix 103
103
G
11 13Right-handed 310
Helix 104
104
G
16 35Right-handed alpha
Helix 105
105
G
57 68Right-handed alpha
Helix 106
106
G
82 84Right-handed 310
Helix 107
107
G
89 99Right-handed alpha
Helix 108
108
G
110 120Right-handed alpha
Helix 109
109
G
134 147Right-handed alpha
Helix 110
110
G
153 155Right-handed 310
Helix 111
111
G
167 179Right-handed alpha
Helix 112
112
G
189 191Right-handed 310
Helix 113
113
G
195 208Right-handed alpha
Helix 114
114
G
218 222Right-handed alpha
Helix 115
115
G
240 253Right-handed 310
Helix 116
116
G
257 262Right-handed alpha
Helix 117
117
G
283 291Right-handed alpha
Helix 118
118
G
302 305Right-handed alpha
Helix 119
119
G
312 331Right-handed alpha
Helix 120
120
H
11 13Right-handed 310
Helix 121
121
H
16 35Right-handed alpha
Helix 122
122
H
57 68Right-handed alpha
Helix 123
123
H
82 84Right-handed 310
Helix 124
124
H
89 99Right-handed alpha
Helix 125
125
H
110 120Right-handed alpha
Helix 126
126
H
134 147Right-handed alpha
Helix 127
127
H
153 155Right-handed 310
Helix 128
128
H
167 179Right-handed alpha
Helix 129
129
H
189 191Right-handed 310
Helix 130
130
H
195 208Right-handed alpha
Helix 131
131
H
218 222Right-handed alpha
Helix 132
132
H
240 253Right-handed 310
Helix 133
133
H
257 262Right-handed alpha
Helix 134
134
H
283 291Right-handed alpha
Helix 135
135
H
302 305Right-handed alpha
Helix 136
136
H
312 331Right-handed alpha
Helix 137
137
I
11 13Right-handed 310
Helix 138
138
I
16 35Right-handed alpha
Helix 139
139
I
57 68Right-handed alpha
Helix 140
140
I
82 84Right-handed 310
Helix 141
141
I
89 99Right-handed alpha
Helix 142
142
I
110 120Right-handed alpha
Helix 143
143
I
134 147Right-handed alpha
Helix 144
144
I
153 155Right-handed 310
Helix 145
145
I
167 179Right-handed alpha
Helix 146
146
I
189 191Right-handed 310
Helix 147
147
I
195 208Right-handed alpha
Helix 148
148
I
218 222Right-handed alpha
Helix 149
149
I
240 253Right-handed 310
Helix 150
150
I
257 262Right-handed alpha
Helix 151
151
I
283 291Right-handed alpha
Helix 152
152
I
302 305Right-handed alpha
Helix 153
153
I
312 331Right-handed alpha
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There are 18 sheets in PDB entry 2OTC. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
72 76first strand
Strand 2
A
46 51parallel
Strand 3
A
102 106parallel
Strand 4
A
123 128parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
269 272first strand
Strand 2
A
227 230parallel
Strand 3
A
157 161parallel
Strand 4
A
182 186parallel
Strand 5
A
213 215parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
72 76first strand
Strand 2
B
46 51parallel
Strand 3
B
102 106parallel
Strand 4
B
123 128parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
269 272first strand
Strand 2
B
227 230parallel
Strand 3
B
157 161parallel
Strand 4
B
182 186parallel
Strand 5
B
213 215parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
72 76first strand
Strand 2
C
46 51parallel
Strand 3
C
102 106parallel
Strand 4
C
123 128parallel
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There are 5 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
269 272first strand
Strand 2
C
227 230parallel
Strand 3
C
157 161parallel
Strand 4
C
182 186parallel
Strand 5
C
213 215parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
72 76first strand
Strand 2
D
46 51parallel
Strand 3
D
102 106parallel
Strand 4
D
123 128parallel
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There are 5 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
269 272first strand
Strand 2
D
227 230parallel
Strand 3
D
157 161parallel
Strand 4
D
182 186parallel
Strand 5
D
213 215parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
72 76first strand
Strand 2
E
46 51parallel
Strand 3
E
102 106parallel
Strand 4
E
123 128parallel
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There are 5 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
269 272first strand
Strand 2
E
227 230parallel
Strand 3
E
157 161parallel
Strand 4
E
182 186parallel
Strand 5
E
213 215parallel
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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
72 76first strand
Strand 2
F
46 51parallel
Strand 3
F
102 106parallel
Strand 4
F
123 128parallel
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There are 5 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
269 272first strand
Strand 2
F
227 230parallel
Strand 3
F
157 161parallel
Strand 4
F
182 186parallel
Strand 5
F
213 215parallel
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There are 4 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
72 76first strand
Strand 2
G
46 51parallel
Strand 3
G
102 106parallel
Strand 4
G
123 128parallel
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There are 5 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
269 272first strand
Strand 2
G
227 230parallel
Strand 3
G
157 161parallel
Strand 4
G
182 186parallel
Strand 5
G
213 215parallel
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There are 4 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
72 76first strand
Strand 2
H
46 51parallel
Strand 3
H
102 106parallel
Strand 4
H
123 128parallel
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There are 5 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
269 272first strand
Strand 2
H
227 230parallel
Strand 3
H
157 161parallel
Strand 4
H
182 186parallel
Strand 5
H
213 215parallel
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There are 4 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
72 76first strand
Strand 2
I
46 51parallel
Strand 3
I
102 106parallel
Strand 4
I
123 128parallel
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There are 5 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
I
269 272first strand
Strand 2
I
227 230parallel
Strand 3
I
157 161parallel
Strand 4
I
182 186parallel
Strand 5
I
213 215parallel
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