Analysis of interatomic Contacts of Structural Units in PDB entry:
2OVB


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2OVB entry

There is 1 chain in PDB entry 2OVB (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 3ALA 269
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 2OVB. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 28Right-handed alpha
Helix 2
2
A
35 41Right-handed alpha
Helix 3
3
A
43 50Right-handed alpha
Helix 4
4
A
72 79Right-handed 310
Helix 5
5
A
91 103Right-handed alpha
Helix 6
6
A
109 124Right-handed alpha
Helix 7
7
A
137 146Right-handed alpha
Helix 8
8
A
148 153Right-handed alpha
Helix 9
9
A
163 169Right-handed alpha
Helix 10
10
A
169 182Right-handed alpha
Helix 11
11
A
188 195Right-handed alpha
Helix 12
12
A
197 212Right-handed alpha
Helix 13
13
A
238 242Right-handed 310
Helix 14
14
A
243 254Right-handed alpha
Helix 15
15
A
257 266Right-handed alpha
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There is 1 sheet ( A) in PDB entry 2OVB.

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
62 66first strand
Strand 2
A
4 9parallel
Strand 3
A
82 89parallel
Strand 4
A
157 162parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il