Analysis of interatomic Contacts of Structural Units in PDB entry:
2OVW

Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
This page provides analyses of contacts formed by:

chains
helices
sheets
residues

For analysis of ligand-protein contacts, use:

LPC software

3D structure can be seen in additional window with STING software for 2OVW entry

There are 4 chains in PDB entry 2OVW (CSU analysis of residue contacts immediately below table)

Chain ID	Initial residue	Terminal residue
A	THR 2	SER 398
B	THR 2	SER 398
C	THR 2	SER 398
D	THR 2	SER 398

There are 49 helices in PDB entry 2OVW. Click on helix of interest for CSU analysis.

Helix number	Helix ID	Chain ID	Initial residue	Terminal residue	Helix class
Helix 1	1	A	35	38	Right-handed alpha
Helix 2	2	A	63	69	Right-handed alpha
Helix 3	3	A	77	83	Right-handed alpha
Helix 4	4	A	155	157	Right-handed 310
Helix 5	5	A	165	167	Right-handed 310
Helix 6	6	A	225	228	Right-handed 310
Helix 7	7	A	243	246	Right-handed 310
Helix 8	8	A	312	317	Right-handed alpha
Helix 9	9	A	321	325	Right-handed alpha
Helix 10	10	A	328	338	Right-handed alpha
Helix 11	11	A	355	358	Right-handed alpha
Helix 12	12	A	360	362	Right-handed 310
Helix 13	13	A	372	378	Right-handed alpha
Helix 14	14	B	35	38	Right-handed alpha
Helix 15	15	B	63	69	Right-handed alpha
Helix 16	16	B	77	83	Right-handed alpha
Helix 17	17	B	155	157	Right-handed 310
Helix 18	18	B	165	167	Right-handed 310
Helix 19	19	B	225	228	Right-handed 310
Helix 20	20	B	312	317	Right-handed alpha
Helix 21	21	B	321	325	Right-handed alpha
Helix 22	22	B	328	338	Right-handed alpha
Helix 23	23	B	355	358	Right-handed alpha
Helix 24	24	B	360	362	Right-handed 310
Helix 25	25	B	372	378	Right-handed alpha
Helix 26	26	C	35	38	Right-handed alpha
Helix 27	27	C	63	69	Right-handed alpha
Helix 28	28	C	77	83	Right-handed alpha
Helix 29	29	C	155	157	Right-handed 310
Helix 30	30	C	165	167	Right-handed 310
Helix 31	31	C	225	228	Right-handed 310
Helix 32	32	C	312	317	Right-handed alpha
Helix 33	33	C	321	325	Right-handed alpha
Helix 34	34	C	328	338	Right-handed alpha
Helix 35	35	C	355	358	Right-handed alpha
Helix 36	36	C	360	362	Right-handed 310
Helix 37	37	C	372	378	Right-handed alpha
Helix 38	38	D	35	38	Right-handed alpha
Helix 39	39	D	63	69	Right-handed alpha
Helix 40	40	D	77	83	Right-handed alpha
Helix 41	41	D	155	157	Right-handed 310
Helix 42	42	D	165	167	Right-handed 310
Helix 43	43	D	225	228	Right-handed 310
Helix 44	44	D	312	317	Right-handed alpha
Helix 45	45	D	321	325	Right-handed alpha
Helix 46	46	D	328	338	Right-handed alpha
Helix 47	47	D	355	358	Right-handed alpha
Helix 48	48	D	360	362	Right-handed 310
Helix 49	49	D	372	378	Right-handed alpha

There are 12 sheets in PDB entry 2OVW. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 13 strands in A sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	292	295	first strand
Strand 2	A	280	289	anti-parallel
Strand 3	A	266	274	anti-parallel
Strand 4	A	126	131	anti-parallel
Strand 5	A	390	392	anti-parallel
Strand 6	A	12	19	parallel
Strand 7	A	23	33	anti-parallel
Strand 8	A	106	110	anti-parallel
Strand 9	A	341	348	anti-parallel
Strand 10	A	140	147	anti-parallel
Strand 11	A	197	203	anti-parallel
Strand 12	A	210	213	anti-parallel
Strand 13	A	239	241	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in B sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	85	88	first strand
Strand 2	A	91	95	anti-parallel
Strand 3	A	383	387	anti-parallel
Strand 4	A	130	132	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	A	192	194	first strand
Strand 2	A	221	223	anti-parallel

Back to list of sheets
Back to top of page

There are 13 strands in D sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	292	295	first strand
Strand 2	B	280	289	anti-parallel
Strand 3	B	266	274	anti-parallel
Strand 4	B	126	131	anti-parallel
Strand 5	B	390	392	anti-parallel
Strand 6	B	12	19	parallel
Strand 7	B	23	33	anti-parallel
Strand 8	B	106	110	anti-parallel
Strand 9	B	341	348	anti-parallel
Strand 10	B	140	147	anti-parallel
Strand 11	B	197	203	anti-parallel
Strand 12	B	210	213	anti-parallel
Strand 13	B	239	241	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in E sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	85	88	first strand
Strand 2	B	91	95	anti-parallel
Strand 3	B	383	387	anti-parallel
Strand 4	B	130	132	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in F sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	B	192	194	first strand
Strand 2	B	221	223	anti-parallel

Back to list of sheets
Back to top of page

There are 13 strands in G sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	292	295	first strand
Strand 2	C	280	289	anti-parallel
Strand 3	C	266	274	anti-parallel
Strand 4	C	126	131	anti-parallel
Strand 5	C	390	392	anti-parallel
Strand 6	C	12	19	parallel
Strand 7	C	23	33	anti-parallel
Strand 8	C	106	110	anti-parallel
Strand 9	C	341	348	anti-parallel
Strand 10	C	140	147	anti-parallel
Strand 11	C	197	203	anti-parallel
Strand 12	C	210	213	anti-parallel
Strand 13	C	239	241	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in H sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	85	88	first strand
Strand 2	C	91	95	anti-parallel
Strand 3	C	383	387	anti-parallel
Strand 4	C	130	132	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in I sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	C	192	194	first strand
Strand 2	C	221	223	anti-parallel

Back to list of sheets
Back to top of page

There are 13 strands in J sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	292	295	first strand
Strand 2	D	280	289	anti-parallel
Strand 3	D	266	274	anti-parallel
Strand 4	D	126	131	anti-parallel
Strand 5	D	390	392	anti-parallel
Strand 6	D	12	19	parallel
Strand 7	D	23	33	anti-parallel
Strand 8	D	106	110	anti-parallel
Strand 9	D	341	348	anti-parallel
Strand 10	D	140	147	anti-parallel
Strand 11	D	197	203	anti-parallel
Strand 12	D	210	213	anti-parallel
Strand 13	D	239	241	anti-parallel

Back to list of sheets
Back to top of page

There are 4 strands in K sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	85	88	first strand
Strand 2	D	91	95	anti-parallel
Strand 3	D	383	387	anti-parallel
Strand 4	D	130	132	anti-parallel

Back to list of sheets
Back to top of page

There are 2 strands in L sheet. Click on strand of interest for CSU analysis.

Strand number	Chain ID	Initial residue	Terminal residue	Strand sense
Strand 1	D	192	194	first strand
Strand 2	D	221	223	anti-parallel

Back to list of sheets
Back to top of page

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il

Analysis of interatomic Contacts of Structural Units in PDB entry: 2OVW

Analysis of interatomic Contacts of Structural Units in PDB entry:
2OVW