Analysis of interatomic Contacts of Structural Units in PDB entry:
2OWY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2OWY entry

There are 2 chains in PDB entry 2OWY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1VAL 306
B
 MET 1VAL 306
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 2OWY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
18 28Right-handed alpha
Helix 2
2
A
76 93Right-handed alpha
Helix 3
3
A
100 116Right-handed alpha
Helix 4
4
A
117 119Right-handed 310
Helix 5
5
A
132 134Right-handed 310
Helix 6
6
A
143 159Right-handed alpha
Helix 7
7
A
171 183Right-handed alpha
Helix 8
8
A
216 225Right-handed alpha
Helix 9
9
A
256 268Right-handed alpha
Helix 10
10
A
270 297Right-handed alpha
Helix 11
11
B
18 24Right-handed alpha
Helix 12
12
B
76 95Right-handed alpha
Helix 13
13
B
100 116Right-handed alpha
Helix 14
14
B
117 119Right-handed 310
Helix 15
15
B
143 155Right-handed alpha
Helix 16
16
B
171 183Right-handed alpha
Helix 17
17
B
216 225Right-handed alpha
Helix 18
18
B
256 264Right-handed alpha
Helix 19
19
B
270 297Right-handed alpha
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There are 5 sheets in PDB entry 2OWY. Click on sheet of interest to get list of strands forming it: A, B, C, D, E,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
40 44first strand
Strand 2
A
63 73anti-parallel
Strand 3
A
58 60anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
40 44first strand
Strand 2
A
63 73anti-parallel
Strand 3
A
121 131anti-parallel
Strand 4
A
136 139anti-parallel
Strand 5
A
7 11anti-parallel
Strand 6
A
163 165anti-parallel
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There are 10 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
250 255first strand
Strand 2
A
240 245anti-parallel
Strand 3
A
228 236anti-parallel
Strand 4
A
189 198anti-parallel
Strand 5
A
206 210anti-parallel
Strand 6
B
206 210anti-parallel
Strand 7
B
189 198anti-parallel
Strand 8
B
228 236anti-parallel
Strand 9
B
240 245anti-parallel
Strand 10
B
250 255anti-parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
40 44first strand
Strand 2
B
63 73anti-parallel
Strand 3
B
59 60anti-parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
40 44first strand
Strand 2
B
63 73anti-parallel
Strand 3
B
121 130anti-parallel
Strand 4
B
136 139anti-parallel
Strand 5
B
7 11anti-parallel
Strand 6
B
163 165anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il