Analysis of interatomic Contacts of Structural Units in PDB entry:
2OX3


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2OX3 entry

There is 1 chain in PDB entry 2OX3 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 1ALA 332
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 14 helices in PDB entry 2OX3. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 11Right-handed alpha
Helix 2
2
A
14 17Right-handed 310
Helix 3
3
A
18 41Right-handed alpha
Helix 4
4
A
64 80Right-handed alpha
Helix 5
5
A
114 118Right-handed 310
Helix 6
6
A
142 147Right-handed alpha
Helix 7
7
A
149 153Right-handed 310
Helix 8
8
A
206 210Right-handed 310
Helix 9
9
A
214 226Right-handed alpha
Helix 10
10
A
228 232Right-handed 310
Helix 11
11
A
242 254Right-handed alpha
Helix 12
12
A
275 286Right-handed alpha
Helix 13
13
A
296 300Right-handed 310
Helix 14
14
A
315 329Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 2OX3. Click on sheet of interest to get list of strands forming it: A, B,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
95 96first strand
Strand 2
A
85 88anti-parallel
Strand 3
A
105 113parallel
Strand 4
A
124 132anti-parallel
Strand 5
A
155 161anti-parallel
Strand 6
A
165 170anti-parallel
Strand 7
A
175 180anti-parallel
Strand 8
A
187 194anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
236 237first strand
Strand 2
A
202 204parallel
Strand 3
A
256 259parallel
Strand 4
A
311 314anti-parallel
Strand 5
A
289 291anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il