Analysis of interatomic Contacts of Structural Units in PDB entry:
2OX7


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2OX7 entry

There are 4 chains in PDB entry 2OX7 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2GLU 145
B
 SER 2GLU 145
C
 SER 2LEU 144
D
 SER 2LEU 144
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 9 helices in PDB entry 2OX7. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
58 60Right-handed 310
Helix 2
2
A
121 127Right-handed alpha
Helix 3
3
B
58 60Right-handed 310
Helix 4
4
B
121 127Right-handed alpha
Helix 5
5
B
140 145Right-handed 310
Helix 6
6
C
58 60Right-handed 310
Helix 7
7
C
121 127Right-handed alpha
Helix 8
8
D
58 60Right-handed 310
Helix 9
9
D
121 127Right-handed alpha
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There are 9 sheets in PDB entry 2OX7. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
54 56first strand
Strand 2
A
31 35anti-parallel
Strand 3
A
16 25anti-parallel
Strand 4
A
7 11anti-parallel
Strand 5
A
65 74anti-parallel
Strand 6
A
80 82anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
38 43first strand
Strand 2
A
46 51anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
110 113first strand
Strand 2
A
101 107anti-parallel
Strand 3
A
85 89anti-parallel
Strand 4
A
131 136anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
46 56first strand
Strand 2
B
31 43anti-parallel
Strand 3
B
16 25anti-parallel
Strand 4
B
7 11anti-parallel
Strand 5
B
65 74anti-parallel
Strand 6
B
80 82anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
110 113first strand
Strand 2
B
102 107anti-parallel
Strand 3
B
85 89anti-parallel
Strand 4
B
131 136anti-parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
48 56first strand
Strand 2
C
31 41anti-parallel
Strand 3
C
16 25anti-parallel
Strand 4
C
7 11anti-parallel
Strand 5
C
65 74anti-parallel
Strand 6
C
80 82anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
110 113first strand
Strand 2
C
102 107anti-parallel
Strand 3
C
85 89anti-parallel
Strand 4
C
131 136anti-parallel
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There are 6 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
49 56first strand
Strand 2
D
31 40anti-parallel
Strand 3
D
16 25anti-parallel
Strand 4
D
7 11anti-parallel
Strand 5
D
65 74anti-parallel
Strand 6
D
80 82anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
110 113first strand
Strand 2
D
101 107anti-parallel
Strand 3
D
85 89anti-parallel
Strand 4
D
131 136anti-parallel
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