Analysis of interatomic Contacts of Structural Units in PDB entry:
2OXN


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2OXN entry

There is 1 chain in PDB entry 2OXN (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MET 1HIS 333
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 2OXN. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 22Right-handed alpha
Helix 2
2
A
32 36Right-handed 310
Helix 3
3
A
38 54Right-handed alpha
Helix 4
4
A
80 87Right-handed 310
Helix 5
5
A
89 107Right-handed alpha
Helix 6
6
A
127 131Right-handed 310
Helix 7
7
A
135 153Right-handed alpha
Helix 8
8
A
184 198Right-handed alpha
Helix 9
9
A
217 220Right-handed 310
Helix 10
10
A
221 226Right-handed alpha
Helix 11
11
A
245 247Right-handed 310
Helix 12
12
A
248 253Right-handed alpha
Helix 13
13
A
254 266Right-handed alpha
Helix 14
14
A
275 286Right-handed alpha
Helix 15
15
A
291 298Right-handed 310
Helix 16
16
A
304 310Right-handed alpha
Helix 17
17
A
311 329Right-handed alpha
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There are 2 sheets in PDB entry 2OXN. Click on sheet of interest to get list of strands forming it: A, B,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
112 113first strand
Strand 2
A
58 61parallel
Strand 3
A
26 31parallel
Strand 4
A
4 6parallel
Strand 5
A
269 271parallel
Strand 6
A
238 243parallel
Strand 7
A
202 205parallel
Strand 8
A
158 162parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
63 65first strand
Strand 2
A
68 69anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il