Analysis of interatomic Contacts of Structural Units in PDB entry:
2OYO


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2OYO entry

There are 2 chains in PDB entry 2OYO (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASP 10ARG 195
B
 ASP 10ARG 195
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 28 helices in PDB entry 2OYO. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
19 23Right-handed 310
Helix 2
2
A
24 39Right-handed alpha
Helix 3
3
A
43 48Right-handed alpha
Helix 4
4
A
51 67Right-handed alpha
Helix 5
5
A
73 89Right-handed alpha
Helix 6
6
A
90 106Right-handed alpha
Helix 7
7
A
107 117Right-handed alpha
Helix 8
8
A
118 121Right-handed 310
Helix 9
9
A
124 140Right-handed alpha
Helix 10
10
A
141 144Right-handed 310
Helix 11
11
A
145 148Right-handed 310
Helix 12
12
A
149 155Right-handed alpha
Helix 13
13
A
158 182Right-handed alpha
Helix 14
14
A
187 193Right-handed alpha
Helix 15
15
B
19 23Right-handed 310
Helix 16
16
B
24 39Right-handed alpha
Helix 17
17
B
43 48Right-handed alpha
Helix 18
18
B
51 67Right-handed alpha
Helix 19
19
B
73 89Right-handed alpha
Helix 20
20
B
90 106Right-handed alpha
Helix 21
21
B
107 117Right-handed alpha
Helix 22
22
B
118 121Right-handed 310
Helix 23
23
B
124 140Right-handed alpha
Helix 24
24
B
141 144Right-handed 310
Helix 25
25
B
145 148Right-handed 310
Helix 26
26
B
149 155Right-handed alpha
Helix 27
27
B
158 182Right-handed alpha
Helix 28
28
B
187 193Right-handed alpha
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There are no sheets in PDB entry 2OYO
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il