Analysis of interatomic Contacts of Structural Units in PDB entry:
2OZ8


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2OZ8 entry

There are 2 chains in PDB entry 2OZ8 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 1PRO 377
B
 LEU 1PRO 377
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 32 helices in PDB entry 2OZ8. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
57 69Right-handed alpha
Helix 2
2
A
69 74Right-handed alpha
Helix 3
3
A
77 82Right-handed alpha
Helix 4
4
A
100 117Right-handed alpha
Helix 5
5
A
119 124Right-handed alpha
Helix 6
6
A
143 157Right-handed alpha
Helix 7
7
A
170 183Right-handed alpha
Helix 8
8
A
200 214Right-handed alpha
Helix 9
9
A
229 240Right-handed alpha
Helix 10
10
A
252 262Right-handed alpha
Helix 11
11
A
273 288Right-handed alpha
Helix 12
12
A
296 300Right-handed 310
Helix 13
13
A
301 308Right-handed alpha
Helix 14
14
A
321 325Right-handed 310
Helix 15
15
A
349 356Right-handed alpha
Helix 16
16
A
363 367Right-handed 310
Helix 17
17
B
57 69Right-handed alpha
Helix 18
18
B
69 74Right-handed alpha
Helix 19
19
B
77 82Right-handed alpha
Helix 20
20
B
100 116Right-handed alpha
Helix 21
21
B
119 124Right-handed alpha
Helix 22
22
B
143 157Right-handed alpha
Helix 23
23
B
170 184Right-handed alpha
Helix 24
24
B
200 214Right-handed alpha
Helix 25
25
B
229 240Right-handed alpha
Helix 26
26
B
252 262Right-handed alpha
Helix 27
27
B
273 288Right-handed alpha
Helix 28
28
B
296 300Right-handed 310
Helix 29
29
B
301 308Right-handed alpha
Helix 30
30
B
321 325Right-handed 310
Helix 31
31
B
349 356Right-handed alpha
Helix 32
32
B
363 367Right-handed 310
Back to top of page

There are 4 sheets in PDB entry 2OZ8. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 3 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
3 20first strand
Strand 2
A
25 38anti-parallel
Strand 3
A
43 50anti-parallel
Back to list of sheets
Back to top of page

There are 11 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
331 332first strand
Strand 2
A
335 337anti-parallel
Strand 3
A
130 136anti-parallel
Strand 4
A
311 316parallel
Strand 5
A
291 293parallel
Strand 6
A
267 270parallel
Strand 7
A
244 247parallel
Strand 8
A
220 222parallel
Strand 9
A
190 194parallel
Strand 10
A
161 165parallel
Strand 11
A
130 136parallel
Back to list of sheets
Back to top of page

There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 20first strand
Strand 2
B
25 38anti-parallel
Strand 3
B
43 50anti-parallel
Back to list of sheets
Back to top of page

There are 11 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
330 332first strand
Strand 2
B
335 337anti-parallel
Strand 3
B
130 136anti-parallel
Strand 4
B
311 316parallel
Strand 5
B
291 293parallel
Strand 6
B
267 270parallel
Strand 7
B
244 247parallel
Strand 8
B
218 222parallel
Strand 9
B
190 194parallel
Strand 10
B
161 165parallel
Strand 11
B
130 136parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il