Analysis of interatomic Contacts of Structural Units in PDB entry:
2OZP


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2OZP entry

There is 1 chain in PDB entry 2OZP (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 4PRO 345
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 17 helices in PDB entry 2OZP. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
14 26Right-handed alpha
Helix 2
2
A
44 48Right-handed 310
Helix 3
3
A
49 53Right-handed 310
Helix 4
4
A
62 66Right-handed 310
Helix 5
5
A
79 84Right-handed alpha
Helix 6
6
A
84 90Right-handed alpha
Helix 7
7
A
106 115Right-handed alpha
Helix 8
8
A
119 123Right-handed 310
Helix 9
9
A
130 140Right-handed alpha
Helix 10
10
A
148 164Right-handed alpha
Helix 11
11
A
180 184Right-handed 310
Helix 12
12
A
188 191Right-handed 310
Helix 13
13
A
192 197Right-handed alpha
Helix 14
14
A
209 217Right-handed alpha
Helix 15
15
A
250 263Right-handed alpha
Helix 16
16
A
282 287Right-handed alpha
Helix 17
17
A
318 330Right-handed alpha
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There are 2 sheets in PDB entry 2OZP. Click on sheet of interest to get list of strands forming it: A, B,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
30 35first strand
Strand 2
A
5 10parallel
Strand 3
A
71 74parallel
Strand 4
A
94 97parallel
Strand 5
A
143 145parallel
Strand 6
A
127 128parallel
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There are 7 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
201 204first strand
Strand 2
A
224 230anti-parallel
Strand 3
A
172 178parallel
Strand 4
A
237 244anti-parallel
Strand 5
A
304 311anti-parallel
Strand 6
A
292 298anti-parallel
Strand 7
A
268 270parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il