Analysis of interatomic Contacts of Structural Units in PDB entry:
2OZR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2OZR entry

There are 8 chains in PDB entry 2OZR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
TYR 83ASP 249
B
TYR 83ASP 249
C
TYR 83ASP 249
D
ASN 84ASP 249
E
TYR 83ASP 249
F
TYR 83ASP 249
G
TYR 83GLY 248
H
TYR 83GLY 248
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 24 helices in PDB entry 2OZR. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
A
109 126Right-handed alpha
Helix 2
2
A
195 207Right-handed alpha
Helix 3
3
A
234 246Right-handed alpha
Helix 4
4
B
109 126Right-handed alpha
Helix 5
5
B
195 207Right-handed alpha
Helix 6
6
B
234 246Right-handed alpha
Helix 7
7
C
109 126Right-handed alpha
Helix 8
8
C
195 207Right-handed alpha
Helix 9
9
C
234 246Right-handed alpha
Helix 10
10
D
109 126Right-handed alpha
Helix 11
11
D
195 207Right-handed alpha
Helix 12
12
D
234 246Right-handed alpha
Helix 13
13
E
109 127Right-handed alpha
Helix 14
14
E
195 208Right-handed alpha
Helix 15
15
E
234 246Right-handed alpha
Helix 16
16
F
109 126Right-handed alpha
Helix 17
17
F
195 208Right-handed alpha
Helix 18
18
F
234 246Right-handed alpha
Helix 19
19
G
109 126Right-handed alpha
Helix 20
20
G
195 207Right-handed alpha
Helix 21
21
G
234 246Right-handed alpha
Helix 22
22
H
109 126Right-handed alpha
Helix 23
23
H
195 207Right-handed alpha
Helix 24
24
H
234 246Right-handed alpha
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There are 16 sheets in PDB entry 2OZR. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
131 135first strand
Strand 2
A
96 101parallel
Strand 3
A
142 147parallel
Strand 4
A
178 181parallel
Strand 5
A
165 167anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
A
186 187first strand
Strand 2
A
193 194parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
131 134first strand
Strand 2
B
96 101parallel
Strand 3
B
142 147parallel
Strand 4
B
178 181parallel
Strand 5
B
165 167anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
B
186 187first strand
Strand 2
B
193 194parallel
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There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
131 135first strand
Strand 2
C
96 101parallel
Strand 3
C
142 147parallel
Strand 4
C
178 181parallel
Strand 5
C
165 167anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
C
186 187first strand
Strand 2
C
193 194parallel
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There are 5 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
131 134first strand
Strand 2
D
96 101parallel
Strand 3
D
142 147parallel
Strand 4
D
178 181parallel
Strand 5
D
165 167anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
D
186 187first strand
Strand 2
D
193 194parallel
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There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
131 134first strand
Strand 2
E
96 101parallel
Strand 3
E
142 147parallel
Strand 4
E
178 181parallel
Strand 5
E
165 167anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
E
186 187first strand
Strand 2
E
193 194parallel
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There are 5 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
131 135first strand
Strand 2
F
96 101parallel
Strand 3
F
142 147parallel
Strand 4
F
178 181parallel
Strand 5
F
165 167anti-parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
F
186 187first strand
Strand 2
F
193 194parallel
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There are 5 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
131 134first strand
Strand 2
G
96 101parallel
Strand 3
G
142 147parallel
Strand 4
G
178 181parallel
Strand 5
G
165 167anti-parallel
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There are 2 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
G
186 187first strand
Strand 2
G
193 194parallel
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There are 5 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
131 134first strand
Strand 2
H
96 101parallel
Strand 3
H
142 147parallel
Strand 4
H
178 181parallel
Strand 5
H
165 167anti-parallel
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There are 2 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number
Chain
ID
Initial
residue
Terminal
residue
Strand sense
Strand 1
H
186 187first strand
Strand 2
H
193 194parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il