Analysis of interatomic Contacts of Structural Units in PDB entry:
2OZV


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2OZV entry

There are 2 chains in PDB entry 2OZV (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 MSE 31VAL 259
B
 MSE 31ALA 261
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 20 helices in PDB entry 2OZV. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
31 39Right-handed alpha
Helix 2
2
A
56 66Right-handed alpha
Helix 3
3
A
77 88Right-handed alpha
Helix 4
4
A
89 94Right-handed 310
Helix 5
5
A
96 98Right-handed 310
Helix 6
6
A
110 117Right-handed alpha
Helix 7
7
A
156 167Right-handed alpha
Helix 8
8
A
179 181Right-handed 310
Helix 9
9
A
182 191Right-handed alpha
Helix 10
10
A
242 250Right-handed alpha
Helix 11
11
B
31 39Right-handed alpha
Helix 12
12
B
56 66Right-handed alpha
Helix 13
13
B
77 89Right-handed alpha
Helix 14
14
B
90 94Right-handed 310
Helix 15
15
B
96 98Right-handed 310
Helix 16
16
B
110 117Right-handed alpha
Helix 17
17
B
155 167Right-handed alpha
Helix 18
18
B
179 181Right-handed 310
Helix 19
19
B
182 191Right-handed alpha
Helix 20
20
B
242 250Right-handed alpha
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There are 4 sheets in PDB entry 2OZV. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
100 104first strand
Strand 2
A
69 75parallel
Strand 3
A
46 50parallel
Strand 4
A
124 129parallel
Strand 5
A
168 178parallel
Strand 6
A
212 219anti-parallel
Strand 7
A
194 203anti-parallel
Strand 8
A
226 227parallel
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There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
100 104first strand
Strand 2
A
69 75parallel
Strand 3
A
46 50parallel
Strand 4
A
124 129parallel
Strand 5
A
168 178parallel
Strand 6
A
212 219anti-parallel
Strand 7
A
194 203anti-parallel
Strand 8
A
231 232parallel
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There are 8 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
100 104first strand
Strand 2
B
69 75parallel
Strand 3
B
46 50parallel
Strand 4
B
124 129parallel
Strand 5
B
168 178parallel
Strand 6
B
212 219anti-parallel
Strand 7
B
194 203anti-parallel
Strand 8
B
226 227parallel
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There are 8 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
100 104first strand
Strand 2
B
69 75parallel
Strand 3
B
46 50parallel
Strand 4
B
124 129parallel
Strand 5
B
168 178parallel
Strand 6
B
212 219anti-parallel
Strand 7
B
194 203anti-parallel
Strand 8
B
231 232parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il