Analysis of interatomic Contacts of Structural Units in PDB entry:
2OZZ


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2OZZ entry

There are 2 chains in PDB entry 2OZZ (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER -2TYR 228
B
 ILE 12TYR 228
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 21 helices in PDB entry 2OZZ. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
-2 8Right-handed alpha
Helix 2
2
A
24 37Right-handed alpha
Helix 3
3
A
50 60Right-handed alpha
Helix 4
4
A
70 80Right-handed alpha
Helix 5
5
A
105 109Right-handed 310
Helix 6
6
A
118 130Right-handed alpha
Helix 7
7
A
140 151Right-handed alpha
Helix 8
8
A
162 169Right-handed alpha
Helix 9
9
A
180 185Right-handed alpha
Helix 10
10
A
196 207Right-handed alpha
Helix 11
11
A
208 221Right-handed alpha
Helix 12
12
B
24 36Right-handed alpha
Helix 13
13
B
50 60Right-handed alpha
Helix 14
14
B
70 74Right-handed alpha
Helix 15
15
B
105 109Right-handed 310
Helix 16
16
B
118 130Right-handed alpha
Helix 17
17
B
140 151Right-handed alpha
Helix 18
18
B
166 169Right-handed 310
Helix 19
19
B
179 185Right-handed alpha
Helix 20
20
B
196 207Right-handed alpha
Helix 21
21
B
208 221Right-handed alpha
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There are 4 sheets in PDB entry 2OZZ. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
43 47first strand
Strand 2
A
15 19parallel
Strand 3
A
65 69parallel
Strand 4
A
188 193anti-parallel
Strand 5
A
82 87anti-parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
135 138first strand
Strand 2
A
111 114parallel
Strand 3
A
155 159parallel
Strand 4
A
97 102anti-parallel
Strand 5
A
171 175anti-parallel
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There are 5 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
43 47first strand
Strand 2
B
15 19parallel
Strand 3
B
65 69parallel
Strand 4
B
188 193anti-parallel
Strand 5
B
82 87anti-parallel
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There are 5 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
135 138first strand
Strand 2
B
111 114parallel
Strand 3
B
155 159parallel
Strand 4
B
97 102anti-parallel
Strand 5
B
171 175anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il