Analysis of interatomic Contacts of Structural Units in PDB entry:
2P0M


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2P0M entry

There are 2 chains in PDB entry 2P0M (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 2ILE 663
B
 GLY 2ILE 663
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 58 helices in PDB entry 2P0M. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
125 140Right-handed alpha
Helix 2
2
A
157 161Right-handed 310
Helix 3
3
A
162 166Right-handed 310
Helix 4
4
A
168 192Right-handed alpha
Helix 5
5
A
193 196Right-handed 310
Helix 6
6
A
200 202Right-handed 310
Helix 7
7
A
203 208Right-handed alpha
Helix 8
8
A
213 222Right-handed alpha
Helix 9
9
A
225 236Right-handed alpha
Helix 10
10
A
259 272Right-handed alpha
Helix 11
11
A
280 283Right-handed 310
Helix 12
12
A
337 359Right-handed alpha
Helix 13
13
A
365 380Right-handed alpha
Helix 14
14
A
384 391Right-handed alpha
Helix 15
15
A
392 395Right-handed 310
Helix 16
16
A
396 405Right-handed alpha
Helix 17
17
A
413 419Right-handed alpha
Helix 18
18
A
424 432Right-handed alpha
Helix 19
19
A
433 435Right-handed 310
Helix 20
20
A
438 442Right-handed 310
Helix 21
21
A
443 452Right-handed alpha
Helix 22
22
A
459 484Right-handed alpha
Helix 23
23
A
486 492Right-handed alpha
Helix 24
24
A
493 505Right-handed alpha
Helix 25
25
A
522 537Right-handed alpha
Helix 26
26
A
538 546Right-handed alpha
Helix 27
27
A
547 552Right-handed alpha
Helix 28
28
A
554 558Right-handed 310
Helix 29
29
A
573 581Right-handed alpha
Helix 30
30
A
583 598Right-handed alpha
Helix 31
31
A
617 645Right-handed alpha
Helix 32
32
B
125 140Right-handed alpha
Helix 33
33
B
157 161Right-handed 310
Helix 34
34
B
175 193Right-handed alpha
Helix 35
35
B
200 208Right-handed 310
Helix 36
36
B
213 223Right-handed alpha
Helix 37
37
B
225 236Right-handed alpha
Helix 38
38
B
258 272Right-handed alpha
Helix 39
39
B
280 283Right-handed 310
Helix 40
40
B
337 359Right-handed alpha
Helix 41
41
B
365 380Right-handed alpha
Helix 42
42
B
384 391Right-handed alpha
Helix 43
43
B
392 395Right-handed 310
Helix 44
44
B
396 405Right-handed alpha
Helix 45
45
B
414 419Right-handed alpha
Helix 46
46
B
424 433Right-handed alpha
Helix 47
47
B
438 442Right-handed 310
Helix 48
48
B
443 451Right-handed alpha
Helix 49
49
B
459 481Right-handed alpha
Helix 50
50
B
488 493Right-handed alpha
Helix 51
51
B
493 505Right-handed alpha
Helix 52
52
B
522 538Right-handed alpha
Helix 53
53
B
538 546Right-handed alpha
Helix 54
54
B
547 553Right-handed alpha
Helix 55
55
B
554 558Right-handed 310
Helix 56
56
B
573 581Right-handed alpha
Helix 57
57
B
583 596Right-handed alpha
Helix 58
58
B
617 644Right-handed alpha
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There are 10 sheets in PDB entry 2P0M. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
46 52first strand
Strand 2
A
3 10anti-parallel
Strand 3
A
76 85anti-parallel
Strand 4
A
93 101anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
32 39first strand
Strand 2
A
21 28anti-parallel
Strand 3
A
60 68anti-parallel
Strand 4
A
107 110anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
142 143first strand
Strand 2
A
152 153anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
243 244first strand
Strand 2
A
274 278anti-parallel
Strand 3
A
301 307anti-parallel
Strand 4
A
311 318anti-parallel
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There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
289 290first strand
Strand 2
A
293 294anti-parallel
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There are 4 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
46 52first strand
Strand 2
B
3 10anti-parallel
Strand 3
B
76 85anti-parallel
Strand 4
B
93 101anti-parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
32 39first strand
Strand 2
B
22 28anti-parallel
Strand 3
B
60 66anti-parallel
Strand 4
B
107 110anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
142 143first strand
Strand 2
B
152 153anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
243 244first strand
Strand 2
B
274 278anti-parallel
Strand 3
B
301 306anti-parallel
Strand 4
B
312 318anti-parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
289 290first strand
Strand 2
B
293 294anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il