Analysis of interatomic Contacts of Structural Units in PDB entry:
2P0O


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2P0O entry

There is 1 chain in PDB entry 2P0O (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 0ASN 369
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 15 helices in PDB entry 2P0O. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
13 26Right-handed alpha
Helix 2
2
A
44 60Right-handed alpha
Helix 3
3
A
68 74Right-handed alpha
Helix 4
4
A
82 89Right-handed alpha
Helix 5
5
A
100 108Right-handed alpha
Helix 6
6
A
121 131Right-handed alpha
Helix 7
7
A
134 136Right-handed 310
Helix 8
8
A
153 167Right-handed alpha
Helix 9
9
A
192 196Right-handed 310
Helix 10
10
A
199 210Right-handed alpha
Helix 11
11
A
224 238Right-handed alpha
Helix 12
12
A
251 256Right-handed alpha
Helix 13
13
A
307 313Right-handed 310
Helix 14
14
A
336 346Right-handed 310
Helix 15
15
A
359 368Right-handed alpha
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There are 3 sheets in PDB entry 2P0O. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 9 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
1 5first strand
Strand 2
A
30 35parallel
Strand 3
A
62 67parallel
Strand 4
A
92 95parallel
Strand 5
A
112 116parallel
Strand 6
A
138 141parallel
Strand 7
A
170 175parallel
Strand 8
A
215 218parallel
Strand 9
A
1 5parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
239 244first strand
Strand 2
A
351 356parallel
Strand 3
A
257 260anti-parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
269 272first strand
Strand 2
A
316 319anti-parallel
Strand 3
A
301 305anti-parallel
Strand 4
A
329 334anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il