Analysis of interatomic Contacts of Structural Units in PDB entry:
2P0V


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2P0V entry

There are 2 chains in PDB entry 2P0V (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 TYR 39GLN 481
B
 TYR 39GLN 481
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 38 helices in PDB entry 2P0V. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
53 67Right-handed alpha
Helix 2
2
A
69 80Right-handed alpha
Helix 3
3
A
81 87Right-handed alpha
Helix 4
4
A
108 115Right-handed alpha
Helix 5
5
A
116 124Right-handed 310
Helix 6
6
A
125 146Right-handed alpha
Helix 7
7
A
159 164Right-handed 310
Helix 8
8
A
178 197Right-handed alpha
Helix 9
9
A
203 220Right-handed alpha
Helix 10
10
A
238 242Right-handed 310
Helix 11
11
A
243 248Right-handed alpha
Helix 12
12
A
275 295Right-handed alpha
Helix 13
13
A
298 320Right-handed alpha
Helix 14
14
A
354 359Right-handed alpha
Helix 15
15
A
365 376Right-handed alpha
Helix 16
16
A
403 413Right-handed alpha
Helix 17
17
A
416 430Right-handed alpha
Helix 18
18
A
454 471Right-handed alpha
Helix 19
19
A
473 478Right-handed alpha
Helix 20
20
B
53 67Right-handed alpha
Helix 21
21
B
69 80Right-handed alpha
Helix 22
22
B
81 87Right-handed alpha
Helix 23
23
B
108 115Right-handed alpha
Helix 24
24
B
116 124Right-handed 310
Helix 25
25
B
125 146Right-handed alpha
Helix 26
26
B
159 164Right-handed 310
Helix 27
27
B
178 197Right-handed alpha
Helix 28
28
B
203 220Right-handed alpha
Helix 29
29
B
238 242Right-handed 310
Helix 30
30
B
243 248Right-handed alpha
Helix 31
31
B
275 295Right-handed alpha
Helix 32
32
B
298 320Right-handed alpha
Helix 33
33
B
354 359Right-handed alpha
Helix 34
34
B
365 376Right-handed alpha
Helix 35
35
B
403 413Right-handed alpha
Helix 36
36
B
416 430Right-handed alpha
Helix 37
37
B
454 471Right-handed alpha
Helix 38
38
B
473 478Right-handed alpha
Back to top of page

There are 12 sheets in PDB entry 2P0V. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
88 90first strand
Strand 2
A
96 98anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
106 107first strand
Strand 2
A
151 152anti-parallel
Strand 3
A
172 174anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
273 274first strand
Strand 2
A
334 335anti-parallel
Strand 3
A
341 342anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
321 324first strand
Strand 2
A
328 331anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
383 385first strand
Strand 2
A
390 392anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
401 402first strand
Strand 2
A
440 442anti-parallel
Strand 3
A
445 450anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
88 90first strand
Strand 2
B
96 98anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
106 107first strand
Strand 2
B
151 152anti-parallel
Strand 3
B
172 174anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
273 274first strand
Strand 2
B
334 335anti-parallel
Strand 3
B
341 342anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
321 324first strand
Strand 2
B
328 331anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
383 385first strand
Strand 2
B
390 392anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
401 402first strand
Strand 2
B
440 442anti-parallel
Strand 3
B
445 450anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il