Analysis of interatomic Contacts of Structural Units in PDB entry:
2P5T


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2P5T entry

There are 9 chains in PDB entry 2P5T (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
X
 UNK 1UNK 33
A
 LEU 67ALA 158
B
 ILE 3LYS 253
C
 MET 66ALA 158
D
 MET 1LEU 251
E
 ASP 64ALA 158
F
 GLU 2LYS 253
G
 MET 66ALA 158
H
 MET 1LYS 253
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 60 helices in PDB entry 2P5T. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
X
1 13Right-handed alpha
Helix 2
2
X
17 21Right-handed 310
Helix 3
3
X
26 32Right-handed alpha
Helix 4
4
A
68 99Right-handed alpha
Helix 5
5
A
109 123Right-handed alpha
Helix 6
6
A
125 129Right-handed 310
Helix 7
7
A
131 155Right-handed alpha
Helix 8
8
B
7 24Right-handed alpha
Helix 9
9
B
40 44Right-handed 310
Helix 10
10
B
45 56Right-handed alpha
Helix 11
11
B
64 70Right-handed 310
Helix 12
12
B
74 80Right-handed alpha
Helix 13
13
B
86 108Right-handed alpha
Helix 14
14
B
121 134Right-handed alpha
Helix 15
15
B
146 161Right-handed alpha
Helix 16
16
B
180 194Right-handed alpha
Helix 17
17
B
219 230Right-handed alpha
Helix 18
18
B
233 251Right-handed alpha
Helix 19
19
C
68 100Right-handed alpha
Helix 20
20
C
109 124Right-handed alpha
Helix 21
21
C
125 129Right-handed 310
Helix 22
22
C
131 157Right-handed alpha
Helix 23
23
D
7 24Right-handed alpha
Helix 24
24
D
45 56Right-handed alpha
Helix 25
25
D
64 72Right-handed 310
Helix 26
26
D
74 83Right-handed alpha
Helix 27
27
D
86 109Right-handed alpha
Helix 28
28
D
121 133Right-handed alpha
Helix 29
29
D
146 165Right-handed alpha
Helix 30
30
D
180 194Right-handed alpha
Helix 31
31
D
219 230Right-handed alpha
Helix 32
32
D
233 251Right-handed alpha
Helix 33
33
E
68 100Right-handed alpha
Helix 34
34
E
109 124Right-handed alpha
Helix 35
35
E
125 129Right-handed 310
Helix 36
36
E
131 153Right-handed alpha
Helix 37
37
F
7 23Right-handed alpha
Helix 38
38
F
45 56Right-handed alpha
Helix 39
39
F
64 72Right-handed 310
Helix 40
40
F
74 82Right-handed alpha
Helix 41
41
F
90 107Right-handed alpha
Helix 42
42
F
121 134Right-handed alpha
Helix 43
43
F
146 163Right-handed alpha
Helix 44
44
F
179 194Right-handed alpha
Helix 45
45
F
219 230Right-handed alpha
Helix 46
46
F
233 248Right-handed alpha
Helix 47
47
G
68 100Right-handed alpha
Helix 48
48
G
109 124Right-handed alpha
Helix 49
49
G
125 128Right-handed 310
Helix 50
50
G
131 158Right-handed alpha
Helix 51
51
H
7 24Right-handed alpha
Helix 52
52
H
45 57Right-handed alpha
Helix 53
53
H
65 72Right-handed 310
Helix 54
54
H
74 83Right-handed alpha
Helix 55
55
H
86 109Right-handed alpha
Helix 56
56
H
121 134Right-handed alpha
Helix 57
57
H
146 163Right-handed alpha
Helix 58
58
H
180 194Right-handed alpha
Helix 59
59
H
219 230Right-handed alpha
Helix 60
60
H
233 251Right-handed alpha
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There are 4 sheets in PDB entry 2P5T. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
61 63first strand
Strand 2
B
112 115parallel
Strand 3
B
33 38parallel
Strand 4
B
137 143parallel
Strand 5
B
199 203parallel
Strand 6
B
209 212anti-parallel
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There are 6 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
61 63first strand
Strand 2
D
112 115parallel
Strand 3
D
33 38parallel
Strand 4
D
137 143parallel
Strand 5
D
199 203parallel
Strand 6
D
209 212anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
61 63first strand
Strand 2
F
112 114parallel
Strand 3
F
33 38parallel
Strand 4
F
137 143parallel
Strand 5
F
199 203parallel
Strand 6
F
209 212anti-parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
61 63first strand
Strand 2
H
112 114parallel
Strand 3
H
33 39parallel
Strand 4
H
137 143parallel
Strand 5
H
199 203parallel
Strand 6
H
209 212anti-parallel
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