Analysis of interatomic Contacts of Structural Units in PDB entry:
2P65


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2P65 entry

There is 1 chain in PDB entry 2P65 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLN 3SER 187
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 10 helices in PDB entry 2P65. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
12 18Right-handed alpha
Helix 2
2
A
27 39Right-handed alpha
Helix 3
3
A
51 54Right-handed 310
Helix 4
4
A
55 69Right-handed alpha
Helix 5
5
A
85 93Right-handed alpha
Helix 6
6
A
95 113Right-handed alpha
Helix 7
7
A
123 128Right-handed 310
Helix 8
8
A
140 150Right-handed alpha
Helix 9
9
A
160 168Right-handed alpha
Helix 10
10
A
171 177Right-handed alpha
Back to top of page

There is 1 sheet ( A) in PDB entry 2P65.

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
9 11first strand
Strand 2
A
80 84anti-parallel
Strand 3
A
117 121parallel
Strand 4
A
155 159parallel
Strand 5
A
45 49parallel
Strand 6
A
178 182parallel
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il