Analysis of interatomic
Contacts of Structural
Units in PDB entry:
Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A.,
Prilusky J., Abola E.E. and Edelman M. (1999) Automated
analysis of interatomic contacts in proteins.
Bioinformatics, 15, 327-332).
This page provides analyses of
contacts formed by:
For analysis of ligand-protein contacts, use:
3D structure can be seen in additional window with
STING software for 2P6V entry
There are 8 chains in PDB entry 2P6V
(CSU analysis of residue contacts immediately below table)
| Chain ID |
Initial residue | Terminal residue |
A
|
SER 582 | VAL 592 |
A
|
CYS 595 | CYS 595 |
A
|
ASN 597 | ILE 603 |
A
|
LEU 605 | GLY 609 |
A
|
GLN 611 | VAL 619 |
A
|
GLU 621 | GLY 629 |
A
|
ILE 631 | LEU 656 |
A
|
ARG 658 | GLN 678 |
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There are 5
helices in PDB entry 2P6V. Click on helix of interest for
CSU analysis.
Helix number
| Helix ID | Chain ID |
Initial residue | Terminal residue |
Helix class |
| Helix 1 |
1 | A
| 583 |
607 | Right-handed alpha |
| Helix 2 |
2 | A
| 612 |
628 | Right-handed alpha |
| Helix 3 |
3 | A
| 632 |
644 | Right-handed alpha |
| Helix 4 |
4 | A
| 651 |
666 | Right-handed alpha |
| Helix 5 |
5 | A
| 669 |
677 | Right-handed alpha |
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There are no sheets in PDB entry
2P6V
Please mail
questions/suggestions concerning this page
to
Vladimir.Sobolev@weizmann.
ac.il