Analysis of interatomic Contacts of Structural Units in PDB entry:
2P72


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2P72 entry

There are 2 chains in PDB entry 2P72 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 PRO 4MET 206
B
 PRO 4MET 208
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 19 helices in PDB entry 2P72. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
17 35Right-handed alpha
Helix 2
2
A
49 68Right-handed alpha
Helix 3
3
A
85 88Right-handed 310
Helix 4
4
A
91 95Right-handed 310
Helix 5
5
A
129 139Right-handed alpha
Helix 6
6
A
150 158Right-handed alpha
Helix 7
7
A
158 163Right-handed alpha
Helix 8
8
A
185 189Right-handed 310
Helix 9
9
A
198 206Right-handed alpha
Helix 10
10
B
17 35Right-handed alpha
Helix 11
11
B
49 56Right-handed alpha
Helix 12
12
B
56 68Right-handed alpha
Helix 13
13
B
85 88Right-handed 310
Helix 14
14
B
91 95Right-handed 310
Helix 15
15
B
129 139Right-handed alpha
Helix 16
16
B
150 158Right-handed alpha
Helix 17
17
B
158 163Right-handed alpha
Helix 18
18
B
185 189Right-handed 310
Helix 19
19
B
198 207Right-handed alpha
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There are 4 sheets in PDB entry 2P72. Click on sheet of interest to get list of strands forming it: A, B, C, D,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
37 41first strand
Strand 2
A
6 11parallel
Strand 3
A
73 77parallel
Strand 4
A
119 126anti-parallel
Strand 5
A
105 108anti-parallel
Strand 6
A
167 170parallel
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There are 3 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
81 83first strand
Strand 2
A
191 193anti-parallel
Strand 3
A
177 178parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
37 40first strand
Strand 2
B
6 10parallel
Strand 3
B
73 77parallel
Strand 4
B
122 126anti-parallel
Strand 5
B
105 108anti-parallel
Strand 6
B
167 170parallel
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There are 3 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
81 83first strand
Strand 2
B
191 193anti-parallel
Strand 3
B
177 178parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il