Analysis of interatomic Contacts of Structural Units in PDB entry:
2P85


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2P85 entry

There are 6 chains in PDB entry 2P85 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 31ARG 494
B
 GLY 31ARG 494
C
 GLY 31ARG 494
D
 GLY 31ARG 494
E
 GLY 31ARG 494
F
 GLY 31ARG 494
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are111 helices in PDB entry 2P85. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
45 49Right-handed 310
Helix 2
2
A
50 52Right-handed 310
Helix 3
3
A
53 66Right-handed alpha
Helix 4
4
A
82 92Right-handed alpha
Helix 5
5
A
104 112Right-handed alpha
Helix 6
6
A
120 138Right-handed alpha
Helix 7
7
A
142 162Right-handed alpha
Helix 8
8
A
170 187Right-handed alpha
Helix 9
9
A
195 212Right-handed alpha
Helix 10
10
A
214 228Right-handed alpha
Helix 11
11
A
232 258Right-handed alpha
Helix 12
12
A
266 278Right-handed alpha
Helix 13
13
A
287 320Right-handed alpha
Helix 14
14
A
320 335Right-handed alpha
Helix 15
15
A
342 348Right-handed 310
Helix 16
16
A
349 364Right-handed alpha
Helix 17
17
A
394 400Right-handed alpha
Helix 18
18
A
412 417Right-handed 310
Helix 19
19
A
441 459Right-handed alpha
Helix 20
20
B
45 49Right-handed 310
Helix 21
21
B
53 66Right-handed alpha
Helix 22
22
B
83 92Right-handed alpha
Helix 23
23
B
104 112Right-handed alpha
Helix 24
24
B
120 137Right-handed alpha
Helix 25
25
B
143 162Right-handed alpha
Helix 26
26
B
170 188Right-handed alpha
Helix 27
27
B
195 212Right-handed alpha
Helix 28
28
B
214 228Right-handed alpha
Helix 29
29
B
232 257Right-handed alpha
Helix 30
30
B
266 279Right-handed alpha
Helix 31
31
B
287 320Right-handed alpha
Helix 32
32
B
320 335Right-handed alpha
Helix 33
33
B
342 348Right-handed 310
Helix 34
34
B
349 364Right-handed alpha
Helix 35
35
B
394 400Right-handed alpha
Helix 36
36
B
412 417Right-handed 310
Helix 37
37
B
441 459Right-handed alpha
Helix 38
38
C
53 66Right-handed alpha
Helix 39
39
C
83 92Right-handed alpha
Helix 40
40
C
104 112Right-handed alpha
Helix 41
41
C
120 138Right-handed alpha
Helix 42
42
C
143 162Right-handed alpha
Helix 43
43
C
170 188Right-handed alpha
Helix 44
44
C
195 212Right-handed alpha
Helix 45
45
C
214 228Right-handed alpha
Helix 46
46
C
232 257Right-handed alpha
Helix 47
47
C
266 279Right-handed alpha
Helix 48
48
C
287 320Right-handed alpha
Helix 49
49
C
320 333Right-handed alpha
Helix 50
50
C
342 348Right-handed 310
Helix 51
51
C
349 364Right-handed alpha
Helix 52
52
C
394 400Right-handed alpha
Helix 53
53
C
412 417Right-handed 310
Helix 54
54
C
441 459Right-handed alpha
Helix 55
55
D
45 49Right-handed 310
Helix 56
56
D
53 66Right-handed alpha
Helix 57
57
D
82 92Right-handed alpha
Helix 58
58
D
104 112Right-handed alpha
Helix 59
59
D
120 138Right-handed alpha
Helix 60
60
D
142 162Right-handed alpha
Helix 61
61
D
170 187Right-handed alpha
Helix 62
62
D
195 213Right-handed alpha
Helix 63
63
D
214 228Right-handed alpha
Helix 64
64
D
232 259Right-handed alpha
Helix 65
65
D
266 279Right-handed alpha
Helix 66
66
D
287 320Right-handed alpha
Helix 67
67
D
320 335Right-handed alpha
Helix 68
68
D
342 348Right-handed 310
Helix 69
69
D
349 364Right-handed alpha
Helix 70
70
D
394 399Right-handed alpha
Helix 71
71
D
412 417Right-handed 310
Helix 72
72
D
441 459Right-handed alpha
Helix 73
73
D
467 471Right-handed 310
Helix 74
74
E
45 49Right-handed 310
Helix 75
75
E
50 52Right-handed 310
Helix 76
76
E
53 66Right-handed alpha
Helix 77
77
E
83 92Right-handed alpha
Helix 78
78
E
104 112Right-handed alpha
Helix 79
79
E
120 138Right-handed alpha
Helix 80
80
E
142 162Right-handed alpha
Helix 81
81
E
170 187Right-handed alpha
Helix 82
82
E
195 212Right-handed alpha
Helix 83
83
E
214 228Right-handed alpha
Helix 84
84
E
232 257Right-handed alpha
Helix 85
85
E
266 278Right-handed alpha
Helix 86
86
E
287 320Right-handed alpha
Helix 87
87
E
320 335Right-handed alpha
Helix 88
88
E
342 348Right-handed 310
Helix 89
89
E
349 364Right-handed alpha
Helix 90
90
E
394 399Right-handed alpha
Helix 91
91
E
412 417Right-handed 310
Helix 92
92
E
441 459Right-handed alpha
Helix 93
93
F
45 49Right-handed 310
Helix 94
94
F
53 66Right-handed alpha
Helix 95
95
F
83 92Right-handed alpha
Helix 96
96
F
104 112Right-handed alpha
Helix 97
97
F
120 137Right-handed alpha
Helix 98
98
F
142 162Right-handed alpha
Helix 99
99
F
170 188Right-handed alpha
Helix 100
100
F
195 212Right-handed alpha
Helix 101
101
F
214 228Right-handed alpha
Helix 102
102
F
232 259Right-handed alpha
Helix 103
103
F
266 277Right-handed alpha
Helix 104
104
F
287 320Right-handed alpha
Helix 105
105
F
320 336Right-handed alpha
Helix 106
106
F
344 348Right-handed 310
Helix 107
107
F
349 363Right-handed alpha
Helix 108
108
F
394 400Right-handed alpha
Helix 109
109
F
412 417Right-handed 310
Helix 110
110
F
441 459Right-handed alpha
Helix 111
111
F
467 471Right-handed 310
Back to top of page

There are 24 sheets in PDB entry 2P85. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T, U, V, W, X,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
68 73first strand
Strand 2
A
76 81anti-parallel
Strand 3
A
390 393parallel
Strand 4
A
372 373anti-parallel
Strand 5
A
100 101anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
378 380first strand
Strand 2
A
383 385anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
460 463first strand
Strand 2
A
490 493anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
477 478first strand
Strand 2
A
482 483anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
68 73first strand
Strand 2
B
76 81anti-parallel
Strand 3
B
390 393parallel
Strand 4
B
372 373anti-parallel
Strand 5
B
100 101anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
378 380first strand
Strand 2
B
383 385anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
460 463first strand
Strand 2
B
490 493anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
475 478first strand
Strand 2
B
482 484anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
68 73first strand
Strand 2
C
76 81anti-parallel
Strand 3
C
390 393parallel
Strand 4
C
372 373anti-parallel
Strand 5
C
100 101anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
167 168first strand
Strand 2
C
489 492anti-parallel
Strand 3
C
461 463anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
378 380first strand
Strand 2
C
383 385anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
475 478first strand
Strand 2
C
482 484anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in M sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
68 73first strand
Strand 2
D
76 81anti-parallel
Strand 3
D
390 393parallel
Strand 4
D
372 373anti-parallel
Strand 5
D
100 101anti-parallel
Back to list of sheets
Back to top of page

There are 3 strands in N sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
167 168first strand
Strand 2
D
489 493anti-parallel
Strand 3
D
460 463anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in O sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
378 380first strand
Strand 2
D
383 385anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in P sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
475 478first strand
Strand 2
D
482 484anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in Q sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
68 73first strand
Strand 2
E
76 81anti-parallel
Strand 3
E
390 393parallel
Strand 4
E
372 373anti-parallel
Strand 5
E
100 101anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in R sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
378 380first strand
Strand 2
E
383 385anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in S sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
460 463first strand
Strand 2
E
490 493anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in T sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
477 478first strand
Strand 2
E
482 483anti-parallel
Back to list of sheets
Back to top of page

There are 5 strands in U sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
68 73first strand
Strand 2
F
76 81anti-parallel
Strand 3
F
390 393parallel
Strand 4
F
372 373anti-parallel
Strand 5
F
100 101anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in V sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
378 379first strand
Strand 2
F
384 385anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in W sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
460 463first strand
Strand 2
F
490 493anti-parallel
Back to list of sheets
Back to top of page

There are 2 strands in X sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
477 478first strand
Strand 2
F
482 483anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il