Analysis of interatomic Contacts of Structural Units in PDB entry:
2P97


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2P97 entry

There are 2 chains in PDB entry 2P97 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 GLY 0ALA 200
B
 GLY 0ALA 200
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 14 helices in PDB entry 2P97. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
43 53Right-handed alpha
Helix 2
2
A
63 67Right-handed 310
Helix 3
3
A
69 77Right-handed alpha
Helix 4
4
A
86 88Right-handed 310
Helix 5
5
A
150 154Right-handed 310
Helix 6
6
A
156 169Right-handed alpha
Helix 7
7
A
187 200Right-handed alpha
Helix 8
8
B
43 53Right-handed alpha
Helix 9
9
B
63 67Right-handed 310
Helix 10
10
B
69 77Right-handed alpha
Helix 11
11
B
86 91Right-handed 310
Helix 12
12
B
150 154Right-handed 310
Helix 13
13
B
156 169Right-handed alpha
Helix 14
14
B
187 200Right-handed alpha
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There are 6 sheets in PDB entry 2P97. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
2 3first strand
Strand 2
A
9 16anti-parallel
Strand 3
A
21 28anti-parallel
Strand 4
A
35 37anti-parallel
Strand 5
A
58 60parallel
Strand 6
A
80 84parallel
Strand 7
A
97 99parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
109 114first strand
Strand 2
A
122 127anti-parallel
Strand 3
A
131 134anti-parallel
Strand 4
A
175 178parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
138 139first strand
Strand 2
A
147 148anti-parallel
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There are 7 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
2 3first strand
Strand 2
B
9 16anti-parallel
Strand 3
B
21 28anti-parallel
Strand 4
B
35 37anti-parallel
Strand 5
B
58 60parallel
Strand 6
B
80 84parallel
Strand 7
B
97 99parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
109 114first strand
Strand 2
B
122 127anti-parallel
Strand 3
B
131 134anti-parallel
Strand 4
B
175 178parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
138 139first strand
Strand 2
B
147 148anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il