Analysis of interatomic Contacts of Structural Units in PDB entry:
2P9J


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2P9J entry

There are 8 chains in PDB entry 2P9J (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ALA 1LYS 160
B
 ALA 1ASP 162
C
 ALA 1ASP 162
D
 ALA 1ASN 161
E
 ALA 1ASN 161
F
 LEU 2ASN 161
G
 ALA 1LEU 159
H
 ALA 1LYS 160
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 71 helices in PDB entry 2P9J. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
1 9Right-handed alpha
Helix 2
2
A
39 50Right-handed alpha
Helix 3
3
A
63 73Right-handed alpha
Helix 4
4
A
85 96Right-handed alpha
Helix 5
5
A
99 101Right-handed 310
Helix 6
6
A
109 111Right-handed 310
Helix 7
7
A
112 119Right-handed alpha
Helix 8
8
A
129 136Right-handed alpha
Helix 9
9
A
147 160Right-handed alpha
Helix 10
10
B
1 8Right-handed alpha
Helix 11
11
B
39 51Right-handed alpha
Helix 12
12
B
63 73Right-handed alpha
Helix 13
13
B
84 97Right-handed alpha
Helix 14
14
B
109 111Right-handed 310
Helix 15
15
B
112 117Right-handed alpha
Helix 16
16
B
129 135Right-handed alpha
Helix 17
17
B
147 162Right-handed alpha
Helix 18
18
C
2 8Right-handed alpha
Helix 19
19
C
39 51Right-handed alpha
Helix 20
20
C
63 73Right-handed alpha
Helix 21
21
C
84 97Right-handed alpha
Helix 22
22
C
99 101Right-handed 310
Helix 23
23
C
109 111Right-handed 310
Helix 24
24
C
112 117Right-handed alpha
Helix 25
25
C
129 134Right-handed alpha
Helix 26
26
C
147 161Right-handed alpha
Helix 27
27
D
1 8Right-handed alpha
Helix 28
28
D
39 52Right-handed alpha
Helix 29
29
D
63 73Right-handed alpha
Helix 30
30
D
84 96Right-handed alpha
Helix 31
31
D
99 101Right-handed 310
Helix 32
32
D
109 111Right-handed 310
Helix 33
33
D
112 119Right-handed alpha
Helix 34
34
D
129 134Right-handed alpha
Helix 35
35
D
147 161Right-handed alpha
Helix 36
36
E
1 9Right-handed alpha
Helix 37
37
E
39 51Right-handed alpha
Helix 38
38
E
63 74Right-handed alpha
Helix 39
39
E
85 97Right-handed alpha
Helix 40
40
E
99 101Right-handed 310
Helix 41
41
E
109 111Right-handed 310
Helix 42
42
E
112 119Right-handed alpha
Helix 43
43
E
129 134Right-handed alpha
Helix 44
44
E
147 159Right-handed alpha
Helix 45
45
F
2 8Right-handed alpha
Helix 46
46
F
39 51Right-handed alpha
Helix 47
47
F
66 73Right-handed alpha
Helix 48
48
F
85 97Right-handed alpha
Helix 49
49
F
99 101Right-handed 310
Helix 50
50
F
109 111Right-handed 310
Helix 51
51
F
112 119Right-handed alpha
Helix 52
52
F
129 134Right-handed alpha
Helix 53
53
F
147 161Right-handed alpha
Helix 54
54
G
1 9Right-handed alpha
Helix 55
55
G
38 51Right-handed alpha
Helix 56
56
G
66 74Right-handed alpha
Helix 57
57
G
85 96Right-handed alpha
Helix 58
58
G
99 101Right-handed 310
Helix 59
59
G
109 111Right-handed 310
Helix 60
60
G
112 119Right-handed alpha
Helix 61
61
G
129 134Right-handed alpha
Helix 62
62
G
147 159Right-handed alpha
Helix 63
63
H
1 9Right-handed alpha
Helix 64
64
H
39 51Right-handed alpha
Helix 65
65
H
64 73Right-handed alpha
Helix 66
66
H
87 96Right-handed alpha
Helix 67
67
H
99 101Right-handed 310
Helix 68
68
H
109 111Right-handed 310
Helix 69
69
H
112 119Right-handed alpha
Helix 70
70
H
129 134Right-handed alpha
Helix 71
71
H
147 159Right-handed alpha
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There are 12 sheets in PDB entry 2P9J. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 6 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
77 80first strand
Strand 2
A
54 59parallel
Strand 3
A
11 14parallel
Strand 4
A
103 107parallel
Strand 5
A
121 124parallel
Strand 6
A
138 139parallel
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There are 9 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
24 28first strand
Strand 2
A
31 38anti-parallel
Strand 3
D
24 28anti-parallel
Strand 4
D
31 38anti-parallel
Strand 5
C
24 28anti-parallel
Strand 6
C
31 38anti-parallel
Strand 7
B
24 28anti-parallel
Strand 8
B
31 38anti-parallel
Strand 9
A
24 28anti-parallel
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There are 6 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
77 80first strand
Strand 2
B
54 59parallel
Strand 3
B
11 14parallel
Strand 4
B
103 107parallel
Strand 5
B
121 124parallel
Strand 6
B
138 139parallel
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There are 6 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
77 80first strand
Strand 2
C
54 59parallel
Strand 3
C
11 14parallel
Strand 4
C
103 107parallel
Strand 5
C
121 124parallel
Strand 6
C
138 139parallel
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There are 6 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
D
77 80first strand
Strand 2
D
54 59parallel
Strand 3
D
11 14parallel
Strand 4
D
103 107parallel
Strand 5
D
121 124parallel
Strand 6
D
138 139parallel
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There are 6 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
77 79first strand
Strand 2
E
54 58parallel
Strand 3
E
11 14parallel
Strand 4
E
103 107parallel
Strand 5
E
121 124parallel
Strand 6
E
138 139parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
24 27first strand
Strand 2
H
35 38anti-parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
E
35 38first strand
Strand 2
F
24 27anti-parallel
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There are 6 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
77 80first strand
Strand 2
F
54 59parallel
Strand 3
F
11 14parallel
Strand 4
F
103 107parallel
Strand 5
F
121 124parallel
Strand 6
F
138 139parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
F
35 38first strand
Strand 2
G
24 27anti-parallel
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There are 6 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
G
77 80first strand
Strand 2
G
54 59parallel
Strand 3
G
11 14parallel
Strand 4
G
103 107parallel
Strand 5
G
121 124parallel
Strand 6
G
138 139parallel
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There are 6 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
H
77 80first strand
Strand 2
H
54 59parallel
Strand 3
H
11 14parallel
Strand 4
H
103 107parallel
Strand 5
H
121 124parallel
Strand 6
H
138 139parallel
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