Analysis of interatomic Contacts of Structural Units in PDB entry:
2PAR


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2PAR entry

There are 2 chains in PDB entry 2PAR (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LYS 2HIS 187
B
 LYS 2HIS 187
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 27 helices in PDB entry 2PAR. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
5 11Right-handed alpha
Helix 2
2
A
12 16Right-handed 310
Helix 3
3
A
29 52Right-handed alpha
Helix 4
4
A
57 67Right-handed alpha
Helix 5
5
A
68 70Right-handed 310
Helix 6
6
A
71 76Right-handed alpha
Helix 7
7
A
92 108Right-handed alpha
Helix 8
8
A
109 111Right-handed 310
Helix 9
9
A
112 121Right-handed alpha
Helix 10
10
A
126 151Right-handed alpha
Helix 11
11
A
153 155Right-handed 310
Helix 12
12
A
156 170Right-handed alpha
Helix 13
13
A
172 182Right-handed alpha
Helix 14
14
A
183 187Right-handed 310
Helix 15
15
B
5 12Right-handed alpha
Helix 16
16
B
13 16Right-handed 310
Helix 17
17
B
29 52Right-handed alpha
Helix 18
18
B
57 68Right-handed alpha
Helix 19
19
B
71 76Right-handed alpha
Helix 20
20
B
90 108Right-handed alpha
Helix 21
21
B
109 111Right-handed 310
Helix 22
22
B
112 121Right-handed alpha
Helix 23
23
B
122 125Right-handed 310
Helix 24
24
B
126 151Right-handed alpha
Helix 25
25
B
153 155Right-handed 310
Helix 26
26
B
156 170Right-handed alpha
Helix 27
27
B
172 182Right-handed alpha
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There are no sheets in PDB entry 2PAR
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il