Analysis of interatomic Contacts of Structural Units in PDB entry:
2PBE


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2PBE entry

There is 1 chain in PDB entry 2PBE (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 1SER 282
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 13 helices in PDB entry 2PBE. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
3 18Right-handed alpha
Helix 2
2
A
51 57Right-handed alpha
Helix 3
3
A
58 66Right-handed 310
Helix 4
4
A
109 116Right-handed alpha
Helix 5
5
A
138 141Right-handed 310
Helix 6
6
A
148 172Right-handed alpha
Helix 7
7
A
174 185Right-handed alpha
Helix 8
8
A
185 203Right-handed alpha
Helix 9
9
A
209 213Right-handed 310
Helix 10
10
A
214 218Right-handed 310
Helix 11
11
A
220 229Right-handed alpha
Helix 12
12
A
235 262Right-handed alpha
Helix 13
13
A
267 282Right-handed alpha
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There is 1 sheet ( A) in PDB entry 2PBE.

There are 8 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
68 72first strand
Strand 2
A
88 94anti-parallel
Strand 3
A
99 106anti-parallel
Strand 4
A
43 49parallel
Strand 5
A
21 26anti-parallel
Strand 6
A
123 126anti-parallel
Strand 7
A
205 207anti-parallel
Strand 8
A
143 144anti-parallel
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