Analysis of interatomic Contacts of Structural Units in PDB entry:
2PE5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2PE5 entry

There are 6 chains in PDB entry 2PE5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
D
 T 5 T 21
E
 A 2 A 18
F
 A 2 A 18
A
 LYS 2THR 329
B
 LYS 2ALA 331
C
 LYS 2THR 329
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 40 helices in PDB entry 2PE5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
5 14Right-handed alpha
Helix 2
2
A
16 26Right-handed alpha
Helix 3
3
A
31 33Right-handed 310
Helix 4
4
A
34 45Right-handed alpha
Helix 5
5
A
50 58Right-handed alpha
Helix 6
6
A
73 90Right-handed alpha
Helix 7
7
A
103 116Right-handed alpha
Helix 8
8
A
129 140Right-handed alpha
Helix 9
9
A
162 177Right-handed alpha
Helix 10
10
A
191 207Right-handed alpha
Helix 11
11
A
221 234Right-handed alpha
Helix 12
12
A
246 261Right-handed alpha
Helix 13
13
A
276 282Right-handed 310
Helix 14
14
A
292 310Right-handed alpha
Helix 15
15
B
5 14Right-handed alpha
Helix 16
16
B
16 25Right-handed alpha
Helix 17
17
B
32 43Right-handed alpha
Helix 18
18
B
50 58Right-handed alpha
Helix 19
19
B
73 90Right-handed alpha
Helix 20
20
B
103 117Right-handed alpha
Helix 21
21
B
129 140Right-handed alpha
Helix 22
22
B
162 178Right-handed alpha
Helix 23
23
B
191 207Right-handed alpha
Helix 24
24
B
221 236Right-handed alpha
Helix 25
25
B
246 260Right-handed alpha
Helix 26
26
B
276 282Right-handed 310
Helix 27
27
B
292 310Right-handed alpha
Helix 28
28
C
9 14Right-handed alpha
Helix 29
29
C
16 24Right-handed alpha
Helix 30
30
C
35 45Right-handed alpha
Helix 31
31
C
50 57Right-handed alpha
Helix 32
32
C
73 91Right-handed alpha
Helix 33
33
C
103 117Right-handed alpha
Helix 34
34
C
129 140Right-handed alpha
Helix 35
35
C
162 178Right-handed alpha
Helix 36
36
C
191 207Right-handed alpha
Helix 37
37
C
221 235Right-handed alpha
Helix 38
38
C
246 260Right-handed alpha
Helix 39
39
C
277 282Right-handed 310
Helix 40
40
C
292 310Right-handed alpha
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There are 12 sheets in PDB entry 2PE5. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G, H, I, J, K, L,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
93 99first strand
Strand 2
A
63 69parallel
Strand 3
A
122 125parallel
Strand 4
A
145 147parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
158 161first strand
Strand 2
A
316 319parallel
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There are 4 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
214 217first strand
Strand 2
A
182 186parallel
Strand 3
A
241 244parallel
Strand 4
A
269 271parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
288 290first strand
Strand 2
A
322 324anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
92 98first strand
Strand 2
B
62 68parallel
Strand 3
B
121 125parallel
Strand 4
B
145 147parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
158 161first strand
Strand 2
B
316 319parallel
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There are 4 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
215 217first strand
Strand 2
B
182 186parallel
Strand 3
B
241 244parallel
Strand 4
B
269 271parallel
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There are 2 strands in H sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
288 289first strand
Strand 2
B
323 324anti-parallel
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There are 4 strands in I sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
93 99first strand
Strand 2
C
63 69parallel
Strand 3
C
121 125parallel
Strand 4
C
145 147parallel
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There are 2 strands in J sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
158 161first strand
Strand 2
C
316 319parallel
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There are 4 strands in K sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
215 217first strand
Strand 2
C
182 186parallel
Strand 3
C
241 244parallel
Strand 4
C
269 271parallel
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There are 2 strands in L sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
C
288 289first strand
Strand 2
C
323 324anti-parallel
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