Analysis of interatomic Contacts of Structural Units in PDB entry:
2PEY


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2PEY entry

There are 2 chains in PDB entry 2PEY (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ARG 51VAL 226
B
 ARG 51VAL 226
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 13 helices in PDB entry 2PEY. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
64 79Right-handed alpha
Helix 2
2
A
88 92Right-handed alpha
Helix 3
3
A
102 123Right-handed alpha
Helix 4
4
A
135 149Right-handed alpha
Helix 5
5
A
161 169Right-handed alpha
Helix 6
6
A
172 179Right-handed alpha
Helix 7
7
A
208 223Right-handed alpha
Helix 8
8
B
64 79Right-handed alpha
Helix 9
9
B
87 92Right-handed alpha
Helix 10
10
B
102 124Right-handed alpha
Helix 11
11
B
135 148Right-handed alpha
Helix 12
12
B
161 169Right-handed alpha
Helix 13
13
B
208 223Right-handed alpha
Back to top of page

There are 2 sheets in PDB entry 2PEY. Click on sheet of interest to get list of strands forming it: A, B,

There are 5 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
83 87first strand
Strand 2
A
126 130parallel
Strand 3
A
53 58parallel
Strand 4
A
153 158parallel
Strand 5
A
200 202parallel
Back to list of sheets
Back to top of page

There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
83 86first strand
Strand 2
B
126 130parallel
Strand 3
B
53 58parallel
Strand 4
B
153 159parallel
Strand 5
B
200 203parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il