Analysis of interatomic Contacts of Structural Units in PDB entry:
2PG0


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2PG0 entry

There are 2 chains in PDB entry 2PG0 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 THR 6LEU 385
B
 ARG 8ASP 384
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 34 helices in PDB entry 2PG0. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
11 29Right-handed alpha
Helix 2
2
A
32 40Right-handed alpha
Helix 3
3
A
43 53Right-handed alpha
Helix 4
4
A
61 65Right-handed 310
Helix 5
5
A
70 85Right-handed alpha
Helix 6
6
A
88 97Right-handed alpha
Helix 7
7
A
98 106Right-handed alpha
Helix 8
8
A
107 121Right-handed alpha
Helix 9
9
A
137 141Right-handed 310
Helix 10
10
A
182 185Right-handed 310
Helix 11
11
A
236 274Right-handed alpha
Helix 12
12
A
284 314Right-handed alpha
Helix 13
13
A
318 344Right-handed alpha
Helix 14
14
A
345 350Right-handed 310
Helix 15
15
A
353 362Right-handed alpha
Helix 16
16
A
363 367Right-handed 310
Helix 17
17
A
371 383Right-handed alpha
Helix 18
18
B
11 29Right-handed alpha
Helix 19
19
B
32 40Right-handed alpha
Helix 20
20
B
43 53Right-handed alpha
Helix 21
21
B
61 65Right-handed 310
Helix 22
22
B
70 85Right-handed alpha
Helix 23
23
B
88 97Right-handed alpha
Helix 24
24
B
98 106Right-handed alpha
Helix 25
25
B
107 121Right-handed alpha
Helix 26
26
B
137 141Right-handed 310
Helix 27
27
B
182 185Right-handed 310
Helix 28
28
B
236 274Right-handed alpha
Helix 29
29
B
284 314Right-handed alpha
Helix 30
30
B
318 344Right-handed alpha
Helix 31
31
B
345 350Right-handed 310
Helix 32
32
B
353 362Right-handed alpha
Helix 33
33
B
363 367Right-handed 310
Helix 34
34
B
371 383Right-handed alpha
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There are 6 sheets in PDB entry 2PG0. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
125 128first strand
Strand 2
A
169 175parallel
Strand 3
A
187 193anti-parallel
Strand 4
A
230 231anti-parallel
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There are 4 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
144 148first strand
Strand 2
A
151 161anti-parallel
Strand 3
A
216 226anti-parallel
Strand 4
A
199 201anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
275 276first strand
Strand 2
A
279 280anti-parallel
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There are 4 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
125 128first strand
Strand 2
B
169 175parallel
Strand 3
B
187 193anti-parallel
Strand 4
B
230 231anti-parallel
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There are 4 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
144 148first strand
Strand 2
B
151 161anti-parallel
Strand 3
B
216 226anti-parallel
Strand 4
B
199 201anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
275 276first strand
Strand 2
B
279 280anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il