Analysis of interatomic Contacts of Structural Units in PDB entry:
2PGS


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2PGS entry

There is 1 chain in PDB entry 2PGS (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 SER 2MSE 438
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 22 helices in PDB entry 2PGS. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
28 39Right-handed alpha
Helix 2
2
A
39 44Right-handed alpha
Helix 3
3
A
45 48Right-handed 310
Helix 4
4
A
62 85Right-handed alpha
Helix 5
5
A
86 89Right-handed 310
Helix 6
6
A
94 109Right-handed alpha
Helix 7
7
A
116 133Right-handed alpha
Helix 8
8
A
141 150Right-handed alpha
Helix 9
9
A
152 163Right-handed alpha
Helix 10
10
A
176 184Right-handed alpha
Helix 11
11
A
209 221Right-handed alpha
Helix 12
12
A
235 257Right-handed alpha
Helix 13
13
A
262 272Right-handed alpha
Helix 14
14
A
292 315Right-handed alpha
Helix 15
15
A
318 323Right-handed alpha
Helix 16
16
A
329 334Right-handed 310
Helix 17
17
A
335 353Right-handed alpha
Helix 18
18
A
356 384Right-handed alpha
Helix 19
19
A
385 388Right-handed 310
Helix 20
20
A
393 400Right-handed alpha
Helix 21
21
A
411 425Right-handed alpha
Helix 22
22
A
427 437Right-handed alpha
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There are no sheets in PDB entry 2PGS
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il