Analysis of interatomic Contacts of Structural Units in PDB entry:
2PH5


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2PH5 entry

There is 1 chain in PDB entry 2PH5 (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 ASN 6GLU 474
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 18 helices in PDB entry 2PH5. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
22 36Right-handed alpha
Helix 2
2
A
39 41Right-handed 310
Helix 3
3
A
54 60Right-handed alpha
Helix 4
4
A
72 77Right-handed alpha
Helix 5
5
A
78 81Right-handed 310
Helix 6
6
A
95 107Right-handed alpha
Helix 7
7
A
133 143Right-handed alpha
Helix 8
8
A
161 177Right-handed alpha
Helix 9
9
A
187 198Right-handed alpha
Helix 10
10
A
227 237Right-handed alpha
Helix 11
11
A
294 303Right-handed alpha
Helix 12
12
A
324 337Right-handed alpha
Helix 13
13
A
379 386Right-handed alpha
Helix 14
14
A
390 409Right-handed alpha
Helix 15
15
A
417 421Right-handed 310
Helix 16
16
A
422 431Right-handed alpha
Helix 17
17
A
432 434Right-handed 310
Helix 18
18
A
465 470Right-handed alpha
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There are 7 sheets in PDB entry 2PH5. Click on sheet of interest to get list of strands forming it: A, B, C, D, E, F, G,

There are 7 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
62 65first strand
Strand 2
A
43 47parallel
Strand 3
A
16 19parallel
Strand 4
A
86 89parallel
Strand 5
A
109 112parallel
Strand 6
A
152 153parallel
Strand 7
A
415 416parallel
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There are 5 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
316 322first strand
Strand 2
A
202 209parallel
Strand 3
A
356 364anti-parallel
Strand 4
A
370 378anti-parallel
Strand 5
A
437 442anti-parallel
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There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
212 213first strand
Strand 2
A
352 354anti-parallel
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There are 2 strands in D sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
221 224first strand
Strand 2
A
344 347parallel
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There are 3 strands in E sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
238 242first strand
Strand 2
A
264 270anti-parallel
Strand 3
A
254 255anti-parallel
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There are 2 strands in F sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
275 278first strand
Strand 2
A
286 289anti-parallel
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There are 2 strands in G sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
305 306first strand
Strand 2
A
311 313anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il