Analysis of interatomic Contacts of Structural Units in PDB entry:
2PHC


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2PHC entry

There is 1 chain in PDB entry 2PHC (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
B
 ILE 2TRP 217
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
Back to top of page

There are 9 helices in PDB entry 2PHC. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
B
20 20Right-handed alpha
Helix 2
2
B
21 31Right-handed alpha
Helix 3
3
B
32 35Right-handed alpha
Helix 4
4
B
63 63Right-handed alpha
Helix 5
5
B
64 83Right-handed alpha
Helix 6
6
B
99 99Right-handed alpha
Helix 7
7
B
100 108Right-handed alpha
Helix 8
8
B
110 120Right-handed alpha
Helix 9
9
B
141 145Right-handed 310
Back to top of page

There are 3 sheets in PDB entry 2PHC. Click on sheet of interest to get list of strands forming it: A, B, C,

There are 4 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
3 5first strand
Strand 2
B
10 14anti-parallel
Strand 3
B
51 56anti-parallel
Strand 4
B
42 45anti-parallel
Back to list of sheets
Back to top of page

There are 8 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
85 92first strand
Strand 2
B
180 184anti-parallel
Strand 3
B
160 164anti-parallel
Strand 4
B
167 171anti-parallel
Strand 5
B
134 138anti-parallel
Strand 6
B
123 129anti-parallel
Strand 7
B
205 211anti-parallel
Strand 8
B
85 92parallel
Back to list of sheets
Back to top of page

There are 2 strands in C sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
153 156first strand
Strand 2
B
175 177anti-parallel
Back to list of sheets
Back to top of page
Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il