Analysis of interatomic Contacts of Structural Units in PDB entry:
2PJL


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2PJL entry

There are 2 chains in PDB entry 2PJL (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
A
 LEU 282MET 517
B
 LEU 282MET 517
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 26 helices in PDB entry 2PJL. Click on helix of interest for CSU analysis.
Helix
number 		Helix
ID		Chain
ID		 Initial
residue		Terminal
residue		 Helix class
Helix 1
1
A
283 288Right-handed alpha
Helix 2
2
A
289 300Right-handed alpha
Helix 3
3
A
320 340Right-handed alpha
Helix 4
4
A
344 348Right-handed 310
Helix 5
5
A
349 372Right-handed alpha
Helix 6
6
A
390 396Right-handed alpha
Helix 7
7
A
400 414Right-handed alpha
Helix 8
8
A
418 432Right-handed alpha
Helix 9
9
A
440 461Right-handed alpha
Helix 10
10
A
471 479Right-handed alpha
Helix 11
11
A
480 499Right-handed alpha
Helix 12
12
A
500 503Right-handed 310
Helix 13
13
A
504 516Right-handed alpha
Helix 14
14
B
283 288Right-handed alpha
Helix 15
15
B
289 300Right-handed alpha
Helix 16
16
B
320 340Right-handed alpha
Helix 17
17
B
344 348Right-handed 310
Helix 18
18
B
349 372Right-handed alpha
Helix 19
19
B
389 396Right-handed alpha
Helix 20
20
B
400 414Right-handed alpha
Helix 21
21
B
418 432Right-handed alpha
Helix 22
22
B
440 461Right-handed alpha
Helix 23
23
B
471 479Right-handed alpha
Helix 24
24
B
480 499Right-handed alpha
Helix 25
25
B
500 503Right-handed 310
Helix 26
26
B
504 517Right-handed alpha
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There are 2 sheets in PDB entry 2PJL. Click on sheet of interest to get list of strands forming it: A, B,

There are 2 strands in A sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
A
379 383first strand
Strand 2
A
386 389anti-parallel
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There are 2 strands in B sheet. Click on strand of interest for CSU analysis.
Strand
number 		Chain
ID		 Initial
residue		Terminal
residue		 Strand sense
Strand 1
B
380 383first strand
Strand 2
B
386 388anti-parallel
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Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il