Analysis of interatomic Contacts of Structural Units in PDB entry:
2PJW


Contacts of Structural Units (CSU) are derived with the CSU software (Sobolev V., Sorokine A., Prilusky J., Abola E.E. and Edelman M. (1999) Automated analysis of interatomic contacts in proteins. Bioinformatics, 15, 327-332).
For CSU analysis of other PDB entry

This page provides analyses of contacts formed by:
For analysis of ligand-protein contacts, use: 3D structure can be seen in additional window with STING software for 2PJW entry

There are 2 chains in PDB entry 2PJW (CSU analysis of residue contacts immediately below table)
Chain ID Initial residueTerminal residue
H
LYS 288ASN 375
V
VAL 348SER 438
Residue contacts

1. List of contacts for up to 10 consecutive residues:
Chain ID from residue number to residue number


2. Detailed analyses of contacts for any single residue:
Residue number chain ID
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There are 6 helices in PDB entry 2PJW. Click on helix of interest for CSU analysis.
Helix
number
Helix
ID
Chain
ID
Initial
residue
Terminal
residue
Helix class
Helix 1
1
H
289 310Right-handed alpha
Helix 2
2
H
316 319Right-handed alpha
Helix 3
3
H
322 371Right-handed alpha
Helix 4
4
V
352 366Right-handed alpha
Helix 5
5
V
374 378Right-handed alpha
Helix 6
6
V
381 436Right-handed alpha
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There are no sheets in PDB entry 2PJW

Please mail questions/suggestions concerning this page to Vladimir.Sobolev@weizmann. ac.il